Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01452 ATGCCTGCCTTTGGATTAGCCGCTAGAGACTCTTCAGGAATTGTCTCCCCTTTTCACTTCTCCAGAAGGGCCAACGGTGATCATGATATCACCATCAACATACTGTATTGTGGGATCTGCCACGGGGATGTTCATTATCTCAGGAATGAAATGCAAGGCCGTAATTTCGTCTATCCTATGGTTGCCGGGCACGAGATTGTGGGGAAAGTGATCAAGGTGGGTCGCAATGTAGAGAAATTCAAACTTGGCGATATAGCAGGTGTAGGTCCAATTTGTGGTTCATGTCAATCCTGTTCTAGCTGCAACCGAGGTTGGGAAGTCTATTGTCCCAAAAGAATCGCGACTTATAACTCAATTGACCGAGATGGATCTGTGACCTACGGTGGCTATTCTGATAAAACTGTGGTTGATGAACATTTTGCTGTCAAAATGCCCAATAGCTTGCCCCTTGATGGAGCAGCGCCACTATTATGTGCTGGACTCACAGTGTACAGTCCCATGAAGTACTATGGATTGTGTGAGGCCGGCCAGCATCTGGGTGTGGTAGGGTTAGGTGGACTAGGCCACGTGGCAGTCAAGTTTGCAAAGGCCATGAACATGAAGGTGACTGTGATAAGTACTTCTCCTGGCAAGAAGAAGGAGGCCTTGGAAAGCCATGGCGCTGATGCTTTCATACTTAGTACCGACCAACAACAATTGCAGGTTGCGAAGGACAGTATGGACGGAATTATAGACACAGTTGCTGGACCTCACTCTCTCGATCCATTGGTTGATTTGTTGAAAACGGGAGGAAAATTGGTTATGGTAGGAGCATCACCAAAAAATCCTGAGTTACCAACTATGCCTTTAATGATGGGGAGGAAGATGATCGCAGGTAGTGCAGCAGGAGGAATGAAAGAGAGCCAAGAGATGATTGATTTTGCAGCGAAGCATAACATCACTGCAGATATTGAGGTTGTTTCAATGGATGAGGTGAACACTGCTTTAGAACGAGTTGCCAAAAACGATGTCAAATATCGTTTTGTGATTGATGTCGCCAACACACTCCATAAGGTCTCTCAATCTGACAATGAATGA 1077 0.4587 MPAFGLAARDSSGIVSPFHFSRRANGDHDITINILYCGICHGDVHYLRNEMQGRNFVYPMVAGHEIVGKVIKVGRNVEKFKLGDIAGVGPICGSCQSCSSCNRGWEVYCPKRIATYNSIDRDGSVTYGGYSDKTVVDEHFAVKMPNSLPLDGAAPLLCAGLTVYSPMKYYGLCEAGQHLGVVGLGGLGHVAVKFAKAMNMKVTVISTSPGKKKEALESHGADAFILSTDQQQLQVAKDSMDGIIDTVAGPHSLDPLVDLLKTGGKLVMVGASPKNPELPTMPLMMGRKMIAGSAAGGMKESQEMIDFAAKHNITADIEVVSMDEVNTALERVAKNDVKYRFVIDVANTLHKVSQSDNE 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01452 358 FunFam Cinnamyl alcohol dehydrogenase 159 315 - -
Accr10g01452 358 PANTHER ALDEHYDE REDUCTASE 3 348 IPR047109 GO:0016616
Accr10g01452 358 Pfam Alcohol dehydrogenase GroES-like domain 28 144 IPR013154 -
Accr10g01452 358 Gene3D - 159 315 - -
Accr10g01452 358 FunFam Putative cinnamyl alcohol dehydrogenase 6 316 345 - -
Accr10g01452 358 SUPERFAMILY GroES-like 12 177 IPR011032 -
Accr10g01452 358 SMART PKS_ER_names_mod 13 343 IPR020843 GO:0016491
Accr10g01452 358 Pfam Zinc-binding dehydrogenase 186 309 IPR013149 -
Accr10g01452 358 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 148 313 IPR036291 -
Accr10g01452 358 Gene3D - 7 345 - -
Accr10g01452 358 CDD CAD1 4 344 IPR047109 GO:0016616
Accr10g01452 358 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 63 77 IPR002328 GO:0008270|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01452 Accr-Chr10 37905037 37908593 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01452 3 349 Monolignol Biosynthesis Gene Families AT2G21890 56.897 1.86e-139 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01452 K23232 - zju:107425057 486.493