Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01450 ATGTCACAGGAAAATAATTCTCCTTCAAAGCAGGCTGCAGCTGCGAAAGAAGACGGTAGCCAGAGCTCCGACGGTGGCGGCGGGAGGAAAAAGGCCTCCGCGAGGCCACCAGAACAAGGTCTCAAGTGTCCAAGGTGTGACTCGCCCAACACCAAATTCTGTTACTACAACAATTACAGCCTGACGCAGCCAAGGCATTTCTGCAAGACTTGCCGGAGGTACTGGACCAAGGGCGGAGCTTTACGCAACGTTCCGATTGGCGGCGGTTGCCGGAAGAACAAGAAGGTCAAGTCATCGTCTTCACGGCTTCCCGGCGACCCCAAGGACCCCGGATTCCCGGGGGAGCTCGGCGGCTTCAAGTTCTTCCACAGCCTTTCACCGTCACTGGATTTTCATCTTGGTGGGTCCCTACCATTCCCTAAACTTAACCATCTTCCACCTCCAACCACATATAACACAGTCTCTTCCTTTGGGGATGTTCAAGCAGCCACCTTTGATCCATCTGGAAGCTCAAATTCTATGATAAATTTCAATTACCCAGGAGGAGGATTCAGCAGTGTAATTCAGGGTATGAGTTCTATGAACGTGAACAGCAACCTCGCTTCTTCAATTGAATCCTTGAGTTCTGTTAATCAAGACTTGCACTGGAAGCTACAGCAACAGAGGCTAGCGATGCTGTTTGGCGGCGATGATAACGGCCAAATCCAGAAAGACGACGGTGTTTCAGCAGTTACTACTCATAATCTTGAGAGCCAAATCCAGAGACCACAACCCACTTTGTTTCAGAATCTTGAGATTTCAAAGGCCGAGATTAATTCCGTGGCTGCTGGTAATAATTCTAGAAAAGAAGGTACAATTAGTGGTGATACCCCCACAGAGTGGTTTTTTGGGAATTCGTTTGCTTCTTCTGTGACTCCTACGCCCACAAGTACCAGTAGTGGTGCGAATAATGGAGGCCATGATAATGCAACCACTAACTGGAGTTCTTTTCATGCTTGGGGTGACGTGCATCAGCAATATAATGCTTTGCCCTAG 1035 0.4889 MSQENNSPSKQAAAAKEDGSQSSDGGGGRKKASARPPEQGLKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKKVKSSSSRLPGDPKDPGFPGELGGFKFFHSLSPSLDFHLGGSLPFPKLNHLPPPTTYNTVSSFGDVQAATFDPSGSSNSMINFNYPGGGFSSVIQGMSSMNVNSNLASSIESLSSVNQDLHWKLQQQRLAMLFGGDDNGQIQKDDGVSAVTTHNLESQIQRPQPTLFQNLEISKAEINSVAAGNNSRKEGTISGDTPTEWFFGNSFASSVTPTPTSTSSGANNGGHDNATTNWSSFHAWGDVHQQYNALP 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01450 344 ProSiteProfiles Zinc finger Dof-type profile. 41 95 IPR003851 GO:0003677|GO:0006355
Accr10g01450 344 Pfam Dof domain, zinc finger 39 95 IPR003851 GO:0003677|GO:0006355
Accr10g01450 344 MobiDBLite consensus disorder prediction 91 111 - -
Accr10g01450 344 ProSitePatterns Zinc finger Dof-type signature. 43 79 IPR003851 GO:0003677|GO:0006355
Accr10g01450 344 MobiDBLite consensus disorder prediction 1 43 - -
Accr10g01450 344 MobiDBLite consensus disorder prediction 1 18 - -
Accr10g01450 344 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 22 225 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01450 Accr-Chr10 37874005 37875039 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01450 38 344 C2C2-Dof Transcription Factor Family AT5G65590 42.249 6.28e-62 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Accr10g01450 zf-Dof 1.3e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01450 - - gmx:100780729 382.104