Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01442 ATGAGGAGGAGAGAGAGGCGGAGGAGATTGGGGTCAAGAGCGAGAGGAGAGGTCATGTGCGATGAGGAGCCATCTCCGAGAGGCGTGCTGGAGATGACGGCGGCGGAGTCATCAGAACGGGGCAGCAGCGGTAGCGGATGCAGCACGTGCTCCTCCTCCTCGGGGGAGAGGCTGCCGGTGGCGGCTATGGGGACGGCGGAGAGGCCGCCGGTGGGGAGGGAGGGGCAGATGGCGCAGTTGAAGGGAGTGATGGAGGCGTTCAGGATAAACTCAGTGAGGAAGCTGTCGGCAATACCGTTGTTACAGTCGACGGTCACCATGTCTAAGAGCCTCAAGAAATTGGTTCGCATTAGGAGCGCTGAAGAAGCCATAGATCTTTCTTCTTTGACCAAATGGCAATCCTACCATTACTCCGACCTCGCCGCCGCCACCGACGACTTCAATCCCGAGAACTTGATCGGGAAAGGAGGACATGCTGAAGTGTACAAAGGACGTTTGCCAGACGGCCGAATAGTAGCCGTAAAGAAGCTAGTGAATGAGGAAAAGGACGACGCAGATAACACCAGTAATTTCCTGACGGAGCTCGGAATCATCGCCCACATCGACCATCCTAAGACTTGCCAATTACTTGGCTTCGGAATCGACAAGGGCCTCTTCTTCGTCCTTCACTATGCCACTCATGGCAGCCTCTCCTCCTTTCTCTTCGGTTCGGAAAAGCTGGAGTGGAGTGTGAGGTACAAGGTGGCCGTAGGAGTTGCAGAGGGACTGCGATATCTGCATCATGAATGCCCAAGACGAATCATTCACAGAGACATCAAGGCTTCCAACATTTTGCTCAATGACAATTATGAACCTGAGATTTCAGATTTTGGATTGGCAAAGTGGCTTCCAGATAAGTGGGACCACCATGTCGTGTTCCCAATAGAAGGCACGTTTGGGTATCTAGCTCCAGAGTATTTCATGCATGGACTTGTGGATGAGAAGACCGATGTATTCGCTTATGGGGTTCTGTTACTTGAGATCATCACAGGCCGCATGGCTGTTGATTCTGATAGTAGGCAAAGTCTTGTGATTTGGGCAAAGGCTCTACCGGACCCAAAAAACATGAAGGAATTAGCAGACCCTAGACTAGAAGATGATTATGATCCTAAAGAAATGGAGCGTGCCATGGTCACTGCTTCCATGTGTGTGCACCACTCAGCTTCCAAGCGTCCCTACATGAATCGGGTAGTGCAGATGCTGAAGGGGGAAGAAGGACCTATTGAAGTAAAGCCACAAAAATCCATGGCCCCAAGATCTCTCATGTTGGATGCCTGTGATCTTGAAGATTATACGTGCTCCAATTACTTGAATGATCTCAATCGTCACAGGCAACTGATCATGGAGTGA 1389 0.5119 MRRRERRRRLGSRARGEVMCDEEPSPRGVLEMTAAESSERGSSGSGCSTCSSSSGERLPVAAMGTAERPPVGREGQMAQLKGVMEAFRINSVRKLSAIPLLQSTVTMSKSLKKLVRIRSAEEAIDLSSLTKWQSYHYSDLAAATDDFNPENLIGKGGHAEVYKGRLPDGRIVAVKKLVNEEKDDADNTSNFLTELGIIAHIDHPKTCQLLGFGIDKGLFFVLHYATHGSLSSFLFGSEKLEWSVRYKVAVGVAEGLRYLHHECPRRIIHRDIKASNILLNDNYEPEISDFGLAKWLPDKWDHHVVFPIEGTFGYLAPEYFMHGLVDEKTDVFAYGVLLLEIITGRMAVDSDSRQSLVIWAKALPDPKNMKELADPRLEDDYDPKEMERAMVTASMCVHHSASKRPYMNRVVQMLKGEEGPIEVKPQKSMAPRSLMLDACDLEDYTCSNYLNDLNRHRQLIME 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01442 462 Gene3D Phosphorylase Kinase; domain 1 117 224 - -
Accr10g01442 462 ProSitePatterns Protein kinases ATP-binding region signature. 153 176 IPR017441 GO:0005524
Accr10g01442 462 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 226 428 - -
Accr10g01442 462 PANTHER OS08G0249100 PROTEIN 20 433 IPR046958 -
Accr10g01442 462 Pfam Protein kinase domain 150 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g01442 462 SMART serkin_6 147 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g01442 462 ProSitePatterns Serine/Threonine protein kinases active-site signature. 267 279 IPR008271 GO:0004672|GO:0006468
Accr10g01442 462 MobiDBLite consensus disorder prediction 36 57 - -
Accr10g01442 462 MobiDBLite consensus disorder prediction 1 57 - -
Accr10g01442 462 Gene3D Transferase(Phosphotransferase) domain 1 226 428 - -
Accr10g01442 462 SUPERFAMILY Protein kinase-like (PK-like) 133 435 IPR011009 -
Accr10g01442 462 ProSiteProfiles Protein kinase domain profile. 147 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01442 Accr-Chr10 37798442 37801045 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01442 134 425 Receptor kinase-like Gene Family AT1G53430 41.667 1.81e-66 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Accr10g01442 Pkinase 3.8e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01442 - - gmx:100818314 558.525