Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01441 ATGGAGTACTGGGAAGAGATTGGCTCTGTAATGAGGAGGAGAGAGAGGCGGAGGAGATTGGGGTCAAGAGCGAGAGGAGAGGTCATGTGCGATGAGGAGCCATCTCCGAGAGGCGTGCTGGAGATGACGGCGGCGGAGTCATCAGAACGGGGCAGCAGCGGTAGCGGATGCAGCACGTGCTCCTCCTCCTCGGGGGAGAGGCTGCCGGTGGCGGCTATGGGGACGGCGGAGAGGCCGCCGGTGGGGAGGGAGGGGCAGATGGCGCAGTTGAAGGGAGTGATGGAGGCGTTCAGGATAAACTCAGTGAGGAAGCTGTCGGCAATACCGTTGTTACAGTCGACGGTCACCATGTCTAAGAGCCTCAAGAAATTGGTTCGCATTAGGAGCGCTGAAGAAGCCATAGATCTTTCTTCTTTGACCAAATGGCAATCCTACCATTACTCCGACCTCGCCGCCGCCACCGACGACTTCAATCCCGAGAACTTGATCGGGAAAGGAGGACATGCTGAAGTGTACAAAGGACGTTTGCCAGACGGCCGAATAGTAGCCGTAAAGAAGCTAGTGAATGAGGAAAAGGACGACGCAGATAACACCAGTAATTTCCTGACGGAGCTCGGAATCATCGCCCACATCGACCATCCTAAGACTTGCCAATTACTTGGCTTCGGAATCGACAAGGGCCTCTTCTTCGTCCTTCACTATGCCACTCATGGCAGCCTCTCCTCCTTTCTCTTCGGTTCGGAAAAGCTGGAGTGGAGTGTGAGGTACAAGGTGGCCGTAGGAGTTGCAGAGGGACTGCGATATCTGCATCATGAATGCCCAAGACGAATCATTCACAGAGACATCAAGGCTTCCAACATTTTGCTCAATGACAATTATGAACCTGAGATTTCAGATTTTGGATTGGCAAAGTGGCTTCCAGATAAGTGGGACCACCATGTCGTGTTCCCAATAGAAGGCACGTTTGGGTATCTAGCTCCAGAGTATTTCATGCATGGACTTGTGGATGAGAAGACCGATGTATTCGCTTATGGGGTTCTGTTACTTGAGATCATCACAGGCCGCATGGCTGTTGATTCTGATAGTAGGCAAAGTCTTGTGATTTGGGCAAAGGCTCTACCGGACCCAAAAAACATGAAGGAATTAGCAGACCCTAGACTAGAAGATGATTATGATCCTAAAGAAATGGAGCGTGCCATGGTCACTGCTTCCATGTGTGTGCACCACTCAGCTTCCAAGCGTCCCTACATGAATCGGGTAGTGCAGATGCTGAAGGGGGAAGAAGGACCTATTGAAGTAAAGCCACAAAAATCCATGGCCCCAAGATCTCTCATGTTGGATGCCTGTGATCTTGAAGATTATACGTGCTCCAATTACTTGAATGATCTCAATCGTCACAGGCAACTGATCATGGAGTGA 1419 0.5109 MEYWEEIGSVMRRRERRRRLGSRARGEVMCDEEPSPRGVLEMTAAESSERGSSGSGCSTCSSSSGERLPVAAMGTAERPPVGREGQMAQLKGVMEAFRINSVRKLSAIPLLQSTVTMSKSLKKLVRIRSAEEAIDLSSLTKWQSYHYSDLAAATDDFNPENLIGKGGHAEVYKGRLPDGRIVAVKKLVNEEKDDADNTSNFLTELGIIAHIDHPKTCQLLGFGIDKGLFFVLHYATHGSLSSFLFGSEKLEWSVRYKVAVGVAEGLRYLHHECPRRIIHRDIKASNILLNDNYEPEISDFGLAKWLPDKWDHHVVFPIEGTFGYLAPEYFMHGLVDEKTDVFAYGVLLLEIITGRMAVDSDSRQSLVIWAKALPDPKNMKELADPRLEDDYDPKEMERAMVTASMCVHHSASKRPYMNRVVQMLKGEEGPIEVKPQKSMAPRSLMLDACDLEDYTCSNYLNDLNRHRQLIME 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01441 472 SMART serkin_6 157 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g01441 472 ProSitePatterns Serine/Threonine protein kinases active-site signature. 277 289 IPR008271 GO:0004672|GO:0006468
Accr10g01441 472 ProSitePatterns Protein kinases ATP-binding region signature. 163 186 IPR017441 GO:0005524
Accr10g01441 472 PANTHER OS08G0249100 PROTEIN 28 443 IPR046958 -
Accr10g01441 472 Gene3D Phosphorylase Kinase; domain 1 127 234 - -
Accr10g01441 472 ProSiteProfiles Protein kinase domain profile. 157 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g01441 472 SUPERFAMILY Protein kinase-like (PK-like) 143 445 IPR011009 -
Accr10g01441 472 MobiDBLite consensus disorder prediction 14 67 - -
Accr10g01441 472 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 236 438 - -
Accr10g01441 472 Pfam Protein kinase domain 160 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g01441 472 MobiDBLite consensus disorder prediction 46 67 - -
Accr10g01441 472 Gene3D Transferase(Phosphotransferase) domain 1 236 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01441 Accr-Chr10 37798442 37801075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01441 144 435 Receptor kinase-like Gene Family AT1G53430 41.667 2.90e-66 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Accr10g01441 Pkinase 4e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01441 - - gmx:100818314 558.525