Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01440 ATGGCTCGGTCTACTAACTGGTTATCGTTTTCTTTGTCGCCGATGGAAATGCTGAGGTCTGCGAACTCGCAGTACCTTCAATACGATGCCGTTTCTGCTGCTGCTCCTCCTCCTCACTACTTCGTCGATAACTTCTATGCCAATGGATGGGGAAGTCCAAAGTCTCAGGTGGTGTACACAGAAGCAGAGCTTAACGAGAATAAAGAAAGTAATGAAGCTGAACAGAACATGGTGGGATCATCATCATTTGGCCCAGGTTTCATGGAAGCTCACCAGCATCAGCATCAGGTTCCAAAACTCGAGGATTTTCTGGGTGATTCTTCGTCGTCTATTATGCGTTACTCTAACAGCCAAACGGAGACTCAAGATTCGTCGACCTTGACCCATATTTACGATCAGGGCTCTGCTTACTTCAGCGACCACCAAGATCTGAAAGCCATCGCTGGATTTCAAGCTTTCTCCACCAACTCGGGCTCTGAAGTGGATGACTCGGCCTCCATCGGCAAGACTCAGGACGGTGCCGGTGGCGAGTTTGCGACCCACTCGATTGATTCGTCAGGGAACGAGCTGACCTTCTCAAGCGGCACCACCACTGGAACTTTGTCCCTCGGCGTCACCACCACCACCACCACCACCCCACAATGTGCCGGTGGCGATCAGAAAGCCGCCATTGTTGCCGTGGATCCCAATAGCTCCAAGAAGATGACCGATACTTTCGGCCAAAGAACTTCGATATACAGGGGAGTCACCAGACACCGATGGACGGGCAGATATGAAGCGCATCTCTGGGATAACAGCTGTAGGAGAGAGGGCCAGGCCAGGAAAGGGCGTCAAGTGTATTTGGGTGGATATGACAAAGAAGACAAGGCCGCAAGAGCTTATGATTTGGCAGCTCTAAAATACTGGGGCCCCACTGCCACGACTAACTTCCCTGTTGCCAGTTATGCAAAGGAAATGGAGGAGATGAAGCATGTTACCAAGCAAGAATTTATCGCCTCACTGCGAAGGAAAAGTAGCGGCTTTTCCAGGGGAGCTTCTATATACAGGGGCGTCACAAGGCATCACCAACAGGGTAGATGGCAAGCCAGAATTGGGCGTGTTGCGGGGAACAAGGATCTGTACCTTGGAACTTTTGCCACTGAAGAGGAAGCAGCTGAGGCATACGATATTGCAGCCATTAAGTTTAGGGGTGCAAATGCTGTGACCAACTTTGAGATGAATCGATATGATGTTGAAGCCATAATGAAGAGTTCTCTTCCCATCGGTGGGGTGGCGAAACGCCTGAAGCTCTCGCTCGAATCCGAGCAGAAAGCGGCACTGAACAATAATAGCCAACAAATCCAATGTACCAACATGAGTAACAACATCAACTTCTCACCAATTCAGGCAGTTTCCTCTGTCCCTTGTGCAATTCCATTTTATCCTGCTGCTGCTGCTTACCATCACCACAATCTCTTGAACCATTTTCGTCCTTCTGATGCCGGCGCTGCTGCAGAATCGGTGGTAACTAACCATTCAGCGACTCCATATCCTACCCTGCCTGCGCCTTCTGAGTTCTTTATATGGCCTCCACATCAGTCATATTGA 1587 0.4991 MARSTNWLSFSLSPMEMLRSANSQYLQYDAVSAAAPPPHYFVDNFYANGWGSPKSQVVYTEAELNENKESNEAEQNMVGSSSFGPGFMEAHQHQHQVPKLEDFLGDSSSSIMRYSNSQTETQDSSTLTHIYDQGSAYFSDHQDLKAIAGFQAFSTNSGSEVDDSASIGKTQDGAGGEFATHSIDSSGNELTFSSGTTTGTLSLGVTTTTTTTPQCAGGDQKAAIVAVDPNSSKKMTDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQVYLGGYDKEDKAARAYDLAALKYWGPTATTNFPVASYAKEMEEMKHVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGANAVTNFEMNRYDVEAIMKSSLPIGGVAKRLKLSLESEQKAALNNNSQQIQCTNMSNNINFSPIQAVSSVPCAIPFYPAAAAYHHHNLLNHFRPSDAGAAAESVVTNHSATPYPTLPAPSEFFIWPPHQSY 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01440 528 SMART rav1_2 347 411 IPR001471 GO:0003700|GO:0006355
Accr10g01440 528 SMART rav1_2 245 317 IPR001471 GO:0003700|GO:0006355
Accr10g01440 528 CDD AP2 346 405 IPR001471 GO:0003700|GO:0006355
Accr10g01440 528 ProSiteProfiles AP2/ERF domain profile. 347 405 IPR001471 GO:0003700|GO:0006355
Accr10g01440 528 FunFam AP2-like ethylene-responsive transcription factor 346 407 - -
Accr10g01440 528 Pfam AP2 domain 347 397 IPR001471 GO:0003700|GO:0006355
Accr10g01440 528 Pfam AP2 domain 245 303 IPR001471 GO:0003700|GO:0006355
Accr10g01440 528 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 90 445 - -
Accr10g01440 528 FunFam AP2-like ethylene-responsive transcription factor ANT 244 313 - -
Accr10g01440 528 SUPERFAMILY DNA-binding domain 346 406 IPR016177 GO:0003677
Accr10g01440 528 CDD AP2 244 313 IPR001471 GO:0003700|GO:0006355
Accr10g01440 528 ProSiteProfiles AP2/ERF domain profile. 245 311 IPR001471 GO:0003700|GO:0006355
Accr10g01440 528 Gene3D AP2/ERF domain 347 407 IPR036955 GO:0003700|GO:0006355
Accr10g01440 528 Gene3D AP2/ERF domain 245 313 IPR036955 GO:0003700|GO:0006355
Accr10g01440 528 MobiDBLite consensus disorder prediction 158 191 - -
Accr10g01440 528 SUPERFAMILY DNA-binding domain 244 312 IPR016177 GO:0003677
Accr10g01440 528 PRINTS Ethylene responsive element binding protein signature 387 407 IPR001471 GO:0003700|GO:0006355
Accr10g01440 528 PRINTS Ethylene responsive element binding protein signature 246 257 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01440 Accr-Chr10 37793623 37797638 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01440 89 528 AP2-EREBP Transcription Factor Family AT5G10510 60.314 9.20e-176 504
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Accr10g01440 AP2 6.5e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01440 K09285 - cave:132171254 655.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr9g01124 9 13834246 13838192 Accr10g01440 10 37793623 37797638 CCT