Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01432 ATGGCTCTTCCCGGTTCTCTGCAGCTGTCCTATGATTCCGGACATTGCAGGAACCTGGGCTGTTATAACCAAGATACGAGGATTATGTACAGAACTAAGTTACATTTATCAAGTGCAGCTCCCATATATCATGTTGCGTTCCTCAAGCAGGATTGCTGGAGAACTAAACTCTTCTGCAATATAAATAGGCCGGTACATACCTTATTTTGCAAATCCCGAGCTTTTAAGTGCCATTCTTTTCTAGGACGAGGCCCATCAAGTGAGCTACCTATTTCTAAGGTGGCAGCCACAGCACTAGCAAGGTCTTATAATCTATTACAATGTAGTCCTGCCACAGTAAAGTTGATTTCAGCCATGGGCATTATTATTTTGGCAGTATGGGGTGTTGGCCCATTAATGTATCACACAAGAAAACTGCTTCTCCAGAGGAGCGATAATAGTTGGAAGAAAAGTAGCACACATTATGTAGTAACTTCTTACATTCAGCCTTTACTATTATGGACTGGGGCTTTACTTATTTGCAGAGCCTTTGACCCATTAAATCTACCTTCAGAAACAGCTCAAGCTGTCAAGGAACGGCTTTTGAGTTTTGTACGATCATTGTCAACTGTACTTGCCTTTGCCTATTGTATATCACGTGTGATTCAACAAGCACAGAAATTATTCATGGAGAGTGCTGCTGATTCCTGTGAGACAAGAAATATGGGATTCCAATTTGCTGGCAAAGCTGTTTATTCTGCAGTATGGATTGCTGCCTTCTCTTTGTTCATGGAGTTGCTGGGCTTTTCTACTCACAGGTGGGTTACCGCTGGAGGTTTCGGGACTGTTTTGTTGACTCTTGCTGGTCGTGAGATATTTACAAACTTCCTTTCAAGTGTGATAATTCATGCAACTCGGCCTTTTGTGGTGAATGAATGGATTCAAACAAAGATTGAAGGATATGAAGTTTCTGGTACTGTGGAGCATGTTGGCTGGTGGTCACCAACAATTATACGTGGGGAAAATCGTGAAGCTCTTTACATTCCAAACCACAAGTTTACAATGAGTGTTGTGCGAAACCTAAGTCAGAAAACACATTGGCGCTTCAAGACGCACCTGGCTATTAGCCATTTGGATGTTAATAAGATAAATAACATTGTTGCTGACATGAGAAAAGTCTTAGCCAAAAATCCTCAAGTTGAGCAGCAGAGGCTGCACAGGAGGGTGTTTCTGGATTATATAGATCCTGAAAATCAGGCTCTTTTGATATTGGTGTCTTGTTTTGTCAAAACCTCACACCAAGAGGAATTTTTGTGCGTGAAGGAAGCTTTACTACTCGATCTTCTTAGGGTCATTGGCCATCACCGAGCCCGACTTGCAACACCAGTTCGTACACTGCAGAAAATTTACAGTGATGCTGACATGGATAATAATATACCATATCTGGATTCTGTATTTAGTGGTACTGCAAGTGTTTCTAACAGTCCAATAATAATAGAACCACCATACAAGATCAAAGCAGATGATACAACAAAAAGTCGATCAACACGCCCATCCAACGAGGGAGATGATAAAAAGACAGCCACACAAACCAAGGTCAGAGAAACTCATTCTGACTCCAAGGCAGATGTTGAAGCTGTGATATCTAATTCTGATGCAAATGGAAACTTGAAGGTAGCCGTTACAACTGAACATGAGCCAAATAGTATGTTAAAGGAAAACCTGGAGGCTCCTCATATGTCTGCTTCTAACTCCAAAGTTAGTGAATTTGGCGCAAATAACTCAACTGAGGAGAATGCTGATGTTAAACAATCTAACAAGAATGCTGTCAAAGGAGGTGGACGTCCTAAGAATATGCCAACAAAACAGAAAGATGAAAGGAAACCGGCAGAGACTCGAATGTCAAGGCCTGTCCTTGAAGAGAATATAGTACTTGGTGTGGCATTGGAAGGATCAAAAAGAACTCTTCCTATTGAGGAGGAGACGGATTCATCTACTGCTCGAGAGGCAAAAGAAATGGCTGCCCAAAGTGGAAATAGATCTCTAATTGCTGGGAATGGGGAAGATAAGTAA 2052 0.4162 MALPGSLQLSYDSGHCRNLGCYNQDTRIMYRTKLHLSSAAPIYHVAFLKQDCWRTKLFCNINRPVHTLFCKSRAFKCHSFLGRGPSSELPISKVAATALARSYNLLQCSPATVKLISAMGIIILAVWGVGPLMYHTRKLLLQRSDNSWKKSSTHYVVTSYIQPLLLWTGALLICRAFDPLNLPSETAQAVKERLLSFVRSLSTVLAFAYCISRVIQQAQKLFMESAADSCETRNMGFQFAGKAVYSAVWIAAFSLFMELLGFSTHRWVTAGGFGTVLLTLAGREIFTNFLSSVIIHATRPFVVNEWIQTKIEGYEVSGTVEHVGWWSPTIIRGENREALYIPNHKFTMSVVRNLSQKTHWRFKTHLAISHLDVNKINNIVADMRKVLAKNPQVEQQRLHRRVFLDYIDPENQALLILVSCFVKTSHQEEFLCVKEALLLDLLRVIGHHRARLATPVRTLQKIYSDADMDNNIPYLDSVFSGTASVSNSPIIIEPPYKIKADDTTKSRSTRPSNEGDDKKTATQTKVRETHSDSKADVEAVISNSDANGNLKVAVTTEHEPNSMLKENLEAPHMSASNSKVSEFGANNSTEENADVKQSNKNAVKGGGRPKNMPTKQKDERKPAETRMSRPVLEENIVLGVALEGSKRTLPIEEETDSSTAREAKEMAAQSGNRSLIAGNGEDK 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01432 683 MobiDBLite consensus disorder prediction 571 599 - -
Accr10g01432 683 MobiDBLite consensus disorder prediction 570 632 - -
Accr10g01432 683 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 667 IPR045042 -
Accr10g01432 683 Gene3D - 301 356 IPR023408 -
Accr10g01432 683 SUPERFAMILY Sm-like ribonucleoproteins 285 355 IPR010920 -
Accr10g01432 683 MobiDBLite consensus disorder prediction 645 683 - -
Accr10g01432 683 MobiDBLite consensus disorder prediction 498 535 - -
Accr10g01432 683 MobiDBLite consensus disorder prediction 611 628 - -
Accr10g01432 683 Pfam Mechanosensitive ion channel 242 445 IPR006685 GO:0016020|GO:0055085
Accr10g01432 683 MobiDBLite consensus disorder prediction 496 535 - -
Accr10g01432 683 Gene3D - 197 299 - -
Accr10g01432 683 MobiDBLite consensus disorder prediction 647 661 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01432 Accr-Chr10 37689999 37696050 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01432 9 683 Mechanosensitive Ion Channel Family AT5G10490 55.066 0.0 706
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01432 K22047 - gmx:100789444 903.279