Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01428 ATGACGTCGTCCGTTCTTTGTTCGCAAGACAGTAATACTTGCCTTGCTGATTTCGAATGTGATGCTACAGATGATTTTGAAATTTCCCGTTCTTCGAACCACCAGAAAACTGGTTCGAACTGGGGTGGATTCGAATCCGTATTGGGTTTTCCCTTACAGAGTGAAGAAACTTTGAGATTATTGGCTGAGAAGGAGAGAGTTTATATGCCCAGGGAAGATTACCTTGTGAGATTGCGTAGGGGGGACTTGGACTTGAGTGTTAGGAGAGAGGCTCTTGATTGGATTTGGAAGGTTCACAACCATTATGGTTTTGGACCATTGACCTTTTGTTTATCCACCAACTACTTTGATCGATTCCTATCGATGCATGATTTTAATAGAAGCCAAAAATGGACTGGGCAACTGTTAGCCGTGGCTTGTTTGTCAATAGCAACCAAAGTGGAGGAAACCGAAATGCCTCAATTGAAAGAATTTCAGGTTGAAGAACCGAAGTTTGTATTTGAAGCCAGAAGCATTCAAAGAATGGAGCTATTGGTACTGAACACATTGCAATGGAAAATGCATGCCTTCACTCCTTGTTCCTTCATAGACTACTTCCTCACTAAAATCCCTTACCACCAACATACAGACACACTAAAGTCATCCATTTCTAGTTCAATAAAACTCATACTTAGTATAATCAGAGTTGTTGATTTCTTGGAATTCAAGCCTTCTGAGATAGCTGCTGCAGTGGCCATTTCTGTTTCAAGAGAACTGCAAATAACTGAGATTGACAAGGCTATAGCTTGTTTTGTGATTGTGCAAAAGGAGAGAGTCCTGAAGTGTGTTGAACTGATCAGAGATTTGCTTTTGGTCCGTGTTCCTTCTTCTAATTTAGGGAGAAACTCAGGGCCATTTTTACCTCAAAGTCCTATGGGGGTGTTGGATGCTGCAAGTTTGAGCTATAAAAGTGAGAAACCATCAGATGGATCATGTCTAAATTCTTCTTCACCTTATAGTCCAAATACTATAAGTAACAAATCTGGAAAACCTGAAAAAGACACTTCCAAGTCATAG 1056 0.4044 MTSSVLCSQDSNTCLADFECDATDDFEISRSSNHQKTGSNWGGFESVLGFPLQSEETLRLLAEKERVYMPREDYLVRLRRGDLDLSVRREALDWIWKVHNHYGFGPLTFCLSTNYFDRFLSMHDFNRSQKWTGQLLAVACLSIATKVEETEMPQLKEFQVEEPKFVFEARSIQRMELLVLNTLQWKMHAFTPCSFIDYFLTKIPYHQHTDTLKSSISSSIKLILSIIRVVDFLEFKPSEIAAAVAISVSRELQITEIDKAIACFVIVQKERVLKCVELIRDLLLVRVPSSNLGRNSGPFLPQSPMGVLDAASLSYKSEKPSDGSCLNSSSPYSPNTISNKSGKPEKDTSKS 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01428 351 Gene3D - 60 278 - -
Accr10g01428 351 MobiDBLite consensus disorder prediction 317 342 - -
Accr10g01428 351 Gene3D - 71 188 - -
Accr10g01428 351 FunFam D6-type cyclin 71 183 - -
Accr10g01428 351 SMART cyclin_7 93 181 IPR013763 -
Accr10g01428 351 SUPERFAMILY Cyclin-like 48 188 IPR036915 -
Accr10g01428 351 Pfam Cyclin, N-terminal domain 59 187 IPR006671 -
Accr10g01428 351 SUPERFAMILY Cyclin-like 172 287 IPR036915 -
Accr10g01428 351 CDD CYCLIN_AtCycD-like_rpt1 87 185 - -
Accr10g01428 351 PANTHER CYCLINS 56 280 IPR039361 -
Accr10g01428 351 SMART Cyclin_C_2 190 335 IPR004367 -
Accr10g01428 351 FunFam D6-type cyclin 184 277 - -
Accr10g01428 351 MobiDBLite consensus disorder prediction 316 351 - -
Accr10g01428 351 CDD CYCLIN_AtCycD-like_rpt2 191 279 - -
Accr10g01428 351 Pfam Cyclin, C-terminal domain 191 291 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01428 Accr-Chr10 37644421 37646370 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01428 53 260 Core Cell Cycle Gene Families AT5G65420 55.450 4.87e-78 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01428 K18810 - qsa:O6P43_025224 387.497