Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01420 ATGGAAGAAGCACTCAGGAGGCTTAACGGGTTGGCCCCGATTCCAGAACCCGACCCACAGCAGGACTTCATCTCCGACCACCCAAAGAAGTGCCCAACCACCACCACCACCACCACCAAGAGGACGGCCAGAGAAAACGGCGGTACAATGAGGTACCGCGGCGTTCGGCGCAGGCCCTGGGGCCGTTACGCGGCAGAGATAAGAGACCCTCAGTCCAAAGAGCGACGGTGGCTCGGCACTTTCGACACGGCGGAGGAAGCCGCATGTGCCTACGACTGCGCCGCCCGTGCCATGCGAGGCCTCAAAGCTCGCACCAATTTCGTTTACCCCACTTCACCCCCCTCTGCCACCACCGAACATCATCTCTTCCCTCATTTCACCTTCCCCAAACAATCTCACAATCATTCGAACAATAACAACCTTAACCGTCATAACCGCCCTTTAGGGTGGCCTTCTTCTTCTTCTAGCTCTAACTCTCACGTTTCTGATTTTTCTTCACCTTCTAATTCTTCTCTGAACATGTTTCTGTTTCGTGACTACCTGAACCCTGCTTCTAATAACCCATCTTTGGTTGCTTCTGCTCAGCAACTTTACAACCCTGGGAACAACAATATCACATGTTCATGTTCTGGTTCCTCGTCCTCCACTGTCCCAGGTTGCTGTGGTTTGAATTCTGCTGGTGGTGATATGGAGAATTCCAAAATTACTACTGAAGCTGATAATGAAGAATTTGAATTCTTTCCCAGAGAGCACTCTGACTCTGGATTGCTGGAAGAGATAGTCCATAAGTTCTTACCAAAATCAAAGCCAGCAGAGATTCGCATGAAAGAGGAGACTCTGTCTCTGTCGACACCGCAGTTGCCTCCTCCTCCTCAGCCAGTGTATGATCATGGCATGTTCACTTCTTCCACTTCTTTGTCCTATGAAAGTCTTAGGAAGAAGGAGGTGACGAAAGCTGAGGATTGTTATAATAATGTGTCAAATTATGATCACCAAGGTTTCTCCATGCAGCAATTAGAGAGCTTTCAGAATGGGTATGGTTACAGCACTGGACAAGGCTTACCTCTAAGAAGCGACCTTCACTTGATGATGAACGAAGCTGCAGGCTACTCCATCATGGAAGATATTTTCCAGCACCCAGAGTTTCTTAATGAATTTGTGGCTAGGATGCAAAATGCTTAA 1182 0.4865 MEEALRRLNGLAPIPEPDPQQDFISDHPKKCPTTTTTTTKRTARENGGTMRYRGVRRRPWGRYAAEIRDPQSKERRWLGTFDTAEEAACAYDCAARAMRGLKARTNFVYPTSPPSATTEHHLFPHFTFPKQSHNHSNNNNLNRHNRPLGWPSSSSSSNSHVSDFSSPSNSSLNMFLFRDYLNPASNNPSLVASAQQLYNPGNNNITCSCSGSSSSTVPGCCGLNSAGGDMENSKITTEADNEEFEFFPREHSDSGLLEEIVHKFLPKSKPAEIRMKEETLSLSTPQLPPPPQPVYDHGMFTSSTSLSYESLRKKEVTKAEDCYNNVSNYDHQGFSMQQLESFQNGYGYSTGQGLPLRSDLHLMMNEAAGYSIMEDIFQHPEFLNEFVARMQNA 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01420 393 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 39 215 - -
Accr10g01420 393 PRINTS Ethylene responsive element binding protein signature 52 63 IPR001471 GO:0003700|GO:0006355
Accr10g01420 393 PRINTS Ethylene responsive element binding protein signature 74 90 IPR001471 GO:0003700|GO:0006355
Accr10g01420 393 Pfam AP2 domain 51 100 IPR001471 GO:0003700|GO:0006355
Accr10g01420 393 CDD AP2 51 107 IPR001471 GO:0003700|GO:0006355
Accr10g01420 393 MobiDBLite consensus disorder prediction 1 41 - -
Accr10g01420 393 FunFam Ethylene-responsive transcription factor 2 50 109 - -
Accr10g01420 393 Gene3D AP2/ERF domain 50 109 IPR036955 GO:0003700|GO:0006355
Accr10g01420 393 MobiDBLite consensus disorder prediction 129 163 - -
Accr10g01420 393 MobiDBLite consensus disorder prediction 27 41 - -
Accr10g01420 393 SMART rav1_2 51 114 IPR001471 GO:0003700|GO:0006355
Accr10g01420 393 MobiDBLite consensus disorder prediction 127 163 - -
Accr10g01420 393 SUPERFAMILY DNA-binding domain 51 108 IPR016177 GO:0003677
Accr10g01420 393 ProSiteProfiles AP2/ERF domain profile. 51 108 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01420 Accr-Chr10 37461281 37462462 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01420 49 267 AP2-EREBP Transcription Factor Family AT1G24590 45.045 2.76e-44 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr10g01420 AP2 2.9e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01420 - - lang:109332560 276.174