Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01419 ATGAAAGAAGCACTCAGGAGGCTTAACGGGTTGGCCCCGATTCCAGAACCCGACCCACAACATGACTCCATCTCCGACCACCCAATGAAGTGCCCAACCACCACCACCAAGAGGACGGCCAGAGAAAATGGCGGCACAATGAGGTACCGTGGCGTTCGGCGCAGGCCCTGGGGCCGTTACGCGGCAGAAATAAGAGAACCTCAGTCCCAAGTGAAACGGTGGCTCGGCACTTTCGACACGGCGGAGGAAGCCGCATGTGCTTACGACTGCGCCGCCCGTGCATGCGCGGTCTCAATGCTCGCACCAATTTCGTTTACCCCACTTCACCCCCCTCTGCCACCACCGAACATCATCTCTTCCCTCATTTCACCTTCCCCAACCAATCTCACAACCATTCGAACAATAACAACCTTAACCGTCATAACCGCCCTTTAG 435 0.5655 MKEALRRLNGLAPIPEPDPQHDSISDHPMKCPTTTTKRTARENGGTMRYRGVRRRPWGRYAAEIREPQSQVKRWLGTFDTAEEAACAYDCAARACAVSMLAPISFTPLHPPLPPPNIISSLISPSPTNLTTIRTITTLTVITAL 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01419 144 MobiDBLite consensus disorder prediction 27 42 - -
Accr10g01419 144 Gene3D AP2/ERF domain 47 105 IPR036955 GO:0003700|GO:0006355
Accr10g01419 144 PRINTS Ethylene responsive element binding protein signature 49 60 IPR001471 GO:0003700|GO:0006355
Accr10g01419 144 PRINTS Ethylene responsive element binding protein signature 71 87 IPR001471 GO:0003700|GO:0006355
Accr10g01419 144 CDD AP2 48 95 IPR001471 GO:0003700|GO:0006355
Accr10g01419 144 SMART rav1_2 48 112 IPR001471 GO:0003700|GO:0006355
Accr10g01419 144 Pfam AP2 domain 48 93 IPR001471 GO:0003700|GO:0006355
Accr10g01419 144 ProSiteProfiles AP2/ERF domain profile. 48 106 IPR001471 GO:0003700|GO:0006355
Accr10g01419 144 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 35 94 - -
Accr10g01419 144 SUPERFAMILY DNA-binding domain 48 95 IPR016177 GO:0003677
Accr10g01419 144 MobiDBLite consensus disorder prediction 1 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01419 Accr-Chr10 37403916 37404350 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01419 1 144 AP2-EREBP Transcription Factor Family AT1G24590 40.741 7.22e-27 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr10g01419 AP2 2.6e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01419 - - vum:124821082 119.012