Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01417 ATGGTCGCCGTCCCATCCACCATCAAATTCCTTTGCAGCTACGGCGGCAAAATCCTCCCTCGCTATCCCGACGGCAAGCTTCGTTATCTCGGCGGCCACACCCGTGTTCTCTCTGTCACCTCCTCCACTTCTTTCTCCGAGCTAATGTTGAAGATGGCAGAGTTGTGTGGCTCATCTGTTAGCCTCCGCTGTCAATTGCCCGCCGAAGATCTCGATGCTCTGGTTTCTATCACTTCAGACGAAGATCTAGCCAATCTCATTGAGGAATATGATCGTTTTGCCTCGCCGTCCTCTTCTTTAAAGATCAGAGCCTTCCTTTCTCCGCCAAAATCATTGAACAAGGTTTCTTCCTCTTCCTCCTCGTCGTTGTCTTTGTCCAAATCATCCTCATCGACATCGTTTTCCTCGTCGTCGTCGTCTTCATCTCGCAGTCTTACCGCTGCTTGTGGTTGCTCTGGTCTTGGATCAAGCCGGAGGTATCCGATGATGCCGGCGATGGCCAACCGGTGCGTCTGCTCCATATTGACGCCGGTTGCCTATCCGATTTGCATAGGAAAGACTTCTGGGATGAACATTCCGCTTCCTCAGAGAAACTCTGGCCACATTTACCTTATCCACAACGGCAACCATTGGCAATAG 639 0.5117 MVAVPSTIKFLCSYGGKILPRYPDGKLRYLGGHTRVLSVTSSTSFSELMLKMAELCGSSVSLRCQLPAEDLDALVSITSDEDLANLIEEYDRFASPSSSLKIRAFLSPPKSLNKVSSSSSSSLSLSKSSSSTSFSSSSSSSSRSLTAACGCSGLGSSRRYPMMPAMANRCVCSILTPVAYPICIGKTSGMNIPLPQRNSGHIYLIHNGNHWQ 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01417 212 PANTHER OS05G0427100 PROTEIN-RELATED 7 146 - -
Accr10g01417 212 Pfam PB1 domain 24 106 IPR000270 GO:0005515
Accr10g01417 212 SMART PB1_new 22 107 IPR000270 GO:0005515
Accr10g01417 212 SUPERFAMILY CAD & PB1 domains 24 116 - -
Accr10g01417 212 CDD PB1_UP2 11 106 - -
Accr10g01417 212 Gene3D - 26 106 - -
Accr10g01417 212 MobiDBLite consensus disorder prediction 110 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01417 Accr-Chr10 37389326 37390059 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01417 2 108 MAP Kinase Kinase Kinase AT1G04700 49.533 9.85e-30 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01417 - - gmx:100815157 217.624