Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01416 ATGGAATTGCCGAGAGACGAGCAGAGCAGGCCATCTCAGAAATCTTCTTCCTCATCCCCTCTCCATCCTAAACCGGACCCCACTTTACTCTTAACCGAATCAGCCATGGTCGCCGTCCCATCCACCATCAAATTCCTTTGCAGCTACGGCGGCAAAATCCTCCCTCGCTATCCCGACGGCAAGCTTCGTTATCTCGGCGGCCACACCCGTGTTCTCTCTGTCACCTCCTCCACTTCTTTCTCCGAGCTAATGTTGAAGATGGCAGAGTTGTGTGGCTCATCTGTTAGCCTCCGCTGTCAATTGCCCGCCGAAGATCTCGATGCTCTGGTTTCTATCACTTCAGACGAAGATCTAGCCAATCTCATTGAGGAATATGATCGTTTTGCCTCGCCGTCCTCTTCTTTAAAGATCAGAGCCTTCCTTTCTCCGCCAAAATCATTGAACAAGGTTTCTTCCTCTTCCTCCTCGTCGTTGTCTTTGTCCAAATCATCCTCATCGACATCGTTTTCCTCGTCGTCGTCGTCTTCATCTCGCAGTCTTACCGCTGCTTGTGGTTGCTCTGGTCTTGGATCAAGCCGGAGGTATCCGATGATGCCGGCGATGGCCAACCGGTGCGTCTGCTCCATATTGACGCCGGTTGCCTATCCGATTTGCATAGGAAAGACTTCTGGGATGAACATTCCGCTTCCTCAGAGAAACTCTGGCCACATTTACCTTATCCACAACGGCAACCATTGGCAATAG 744 0.5121 MELPRDEQSRPSQKSSSSSPLHPKPDPTLLLTESAMVAVPSTIKFLCSYGGKILPRYPDGKLRYLGGHTRVLSVTSSTSFSELMLKMAELCGSSVSLRCQLPAEDLDALVSITSDEDLANLIEEYDRFASPSSSLKIRAFLSPPKSLNKVSSSSSSSLSLSKSSSSTSFSSSSSSSSRSLTAACGCSGLGSSRRYPMMPAMANRCVCSILTPVAYPICIGKTSGMNIPLPQRNSGHIYLIHNGNHWQ 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01416 247 Gene3D - 61 141 - -
Accr10g01416 247 SMART PB1_new 57 142 IPR000270 GO:0005515
Accr10g01416 247 MobiDBLite consensus disorder prediction 1 27 - -
Accr10g01416 247 Pfam PB1 domain 59 141 IPR000270 GO:0005515
Accr10g01416 247 SUPERFAMILY CAD & PB1 domains 59 151 - -
Accr10g01416 247 PANTHER OS05G0427100 PROTEIN-RELATED 14 181 - -
Accr10g01416 247 MobiDBLite consensus disorder prediction 145 181 - -
Accr10g01416 247 CDD PB1_UP2 46 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01416 Accr-Chr10 37389221 37390059 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01416 40 141 MAP Kinase Kinase Kinase AT5G57610 50.980 3.13e-30 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01416 - - gmx:100815157 219.55