Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01410 ATGGCTCTGCTTCTAGGCGGTATTCAGCCTCAGATACTAACTTCCTTTCCTCATGATCATAGAAAACCTTGTATTAGAGTTTGTCGTAGACGCTTCCATTTCGCCGTTAATACTAGAAATCATACTGTTCCTTCCAGTACTTTTGATCGGAGACGCATACTTGCGAGTACTCCAAAATCAGCGTCTATTGATGGGTTTTCTGTCCAGGAGAATCCAGAAGCTTTAAGTGAAGAAAAAGAGTTTCTGAAGAGGCTTAGGAGATGGTTCAGCTTTCTTCCTTCGATTTTGCCTGGAGGAAGCTGGTGGAACTTCTCCGAAAACGTCGAAATTCAAGATTCAGCTAAACCCGTTACTGTGTGGCGCGCGCTTGCCAAAATGTGGCAACTTGTTGCTCAAGACAGATGGATTATTTTCGCTGCATTCTGTGCTCTGATTCTTGCGGCGGTTTCGGAGATTTCCATACCGCATTTCTTAACAGCATCTATCTTCTCCGCACAGGGTGCGGATGTTCCGGTTTTCCGTCGTAATGTGCTCCTCTTGGTTCTGTTCTGTATAAATTCGGGAATTTTCAGTGGGATACGAGGCTGCTGTTTCGGAATTGCAAATATGATCCTTGTAAAGAGAATGAGAGAAACATTATACTCCTCCCTTCTTCTTCAGGATATATCATTTTTTGACAATGCAACAGTTGGTGATCTGACAAGTAGGCTTGGTGCTGATTGCCAACAAGTTTCACGTGTTATTGGAAATGATCTTAACTTGATATTGCGCAATGTTCTTCAGGGAACAGGTGCATTAACCTACTTGTTATTTTTGTCTTGGCCACTTGGTTTATTTACATTGATGATATGCTCTATATTATCAGCAGTTTTGCTACTTTATGGAAGGTACCAGAAAAAGGCTGCAAAGTTGATCCAAGATGTCACTGCTTCTGCCAATGAAGTTGCACAAGAGACATTTTCTCTTATTAGAACTGTCCGTGTTTATGGAACAGAAGAAGAAGAACTTGGAAGGTACAAATGGTGGCTGGAAAAGTTAGCTGATATAAGCTTGAGACAAAGTGCTGCTTATGGATTTTGGAATTTCAGCTTCAATAATCTTTATCATTCAACTCAGGTTATTGCCGTGCTGTTTGGAGGAATGTCTATTCTATCAGGTCATATTACAGCAGAGAAACTTACTAAGTTTATACTATACAGTGAATGGCTTATTTATTCAACCTGGTGGGTGGGAGACAGTATATCATCTTTGATGCAATCTGTTGGGGCTAGTGAAAAAGTATTCCGATTGATGGATCTCTTACCAAGCAGCCAGTTCCATACAAAAGGAATGAAGCTGCAGAGGTTAACTGGGAATATTGAATTTTTAAATGTATCTTTTCACTATCCTTCAAGACCAACGGTATCTGTAGTGCAGCATGTAAATTTTGCTGTTCGACCTGGTGAGGTGGTTGCAATAGCTGGTCTTAGTGGCAGTGGAAAAAGTACACTGGTGAACCTTCTGCTCCACCTATACGAGCCAACCAATGGTCAGATTTTGATTGATGGCGTCCCTCTTAATGAGTTGGACATCATGTGGTGGAGAGAAAAAATTGGATTTGTTGGACAGGAACCTAAGCTCTTCAGAATGGATATTAGTTCAAACATAAGATATGGATGCACTAGAGAGATTACGCAAAAGGATGTTGAATGGGCTGCAAAACAAGCTTATGCCCACGACTTCATCTTAGCACTTCCTAATGGCTATGAAACACTTGTTGATGATGATTTGTTAAGTGGGGGACAAAAGCAGCGAATTGCTATTGCTAGAGCTATTCTCAGGGATCCAAAAGTATTGATCCTTGATGAAGCCACTAGTGCACTGGATGCTGAGAGTGAATATAATGTCAAGGGTGTTCTTCGTTCTGTTAAAAATGACTCCCTGAGTAAGAGATGTGTTATTGTAATTGCACACAGGCTTTCTACCATACAAGCAGCAGACAGGATTGTGGTAATGGATAGTGGTAAAATTGTTGAGATTGGCAGTCACAGAGAACTTCTCTCAAGAGATGGTTTGTATGCACGGTTGACCAGTAGACAAGCGGACTTAGTGGAATGA 2097 0.412 MALLLGGIQPQILTSFPHDHRKPCIRVCRRRFHFAVNTRNHTVPSSTFDRRRILASTPKSASIDGFSVQENPEALSEEKEFLKRLRRWFSFLPSILPGGSWWNFSENVEIQDSAKPVTVWRALAKMWQLVAQDRWIIFAAFCALILAAVSEISIPHFLTASIFSAQGADVPVFRRNVLLLVLFCINSGIFSGIRGCCFGIANMILVKRMRETLYSSLLLQDISFFDNATVGDLTSRLGADCQQVSRVIGNDLNLILRNVLQGTGALTYLLFLSWPLGLFTLMICSILSAVLLLYGRYQKKAAKLIQDVTASANEVAQETFSLIRTVRVYGTEEEELGRYKWWLEKLADISLRQSAAYGFWNFSFNNLYHSTQVIAVLFGGMSILSGHITAEKLTKFILYSEWLIYSTWWVGDSISSLMQSVGASEKVFRLMDLLPSSQFHTKGMKLQRLTGNIEFLNVSFHYPSRPTVSVVQHVNFAVRPGEVVAIAGLSGSGKSTLVNLLLHLYEPTNGQILIDGVPLNELDIMWWREKIGFVGQEPKLFRMDISSNIRYGCTREITQKDVEWAAKQAYAHDFILALPNGYETLVDDDLLSGGQKQRIAIARAILRDPKVLILDEATSALDAESEYNVKGVLRSVKNDSLSKRCVIVIAHRLSTIQAADRIVVMDSGKIVEIGSHRELLSRDGLYARLTSRQADLVE 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01410 698 FunFam Multidrug ABC transporter ATP-binding protein 445 696 - -
Accr10g01410 698 ProSitePatterns ABC transporters family signature. 591 605 IPR017871 GO:0005524|GO:0016887
Accr10g01410 698 CDD ABC_6TM_TAP 140 427 - -
Accr10g01410 698 PANTHER ABC TRANSPORTER B FAMILY 120 689 IPR039421 -
Accr10g01410 698 Gene3D ABC transporter type 1, transmembrane domain 120 439 IPR036640 GO:0005524|GO:0016020
Accr10g01410 698 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 138 419 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr10g01410 698 Pfam ABC transporter transmembrane region 138 404 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr10g01410 698 FunFam ABC transporter B family member 26, chloroplastic 119 438 - -
Accr10g01410 698 Pfam ABC transporter 472 619 IPR003439 GO:0005524
Accr10g01410 698 SUPERFAMILY ABC transporter transmembrane region 125 435 IPR036640 GO:0005524|GO:0016020
Accr10g01410 698 SMART AAA_5 480 669 IPR003593 GO:0016887
Accr10g01410 698 Gene3D - 443 696 IPR027417 -
Accr10g01410 698 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 453 692 IPR003439 GO:0005524
Accr10g01410 698 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 443 693 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01410 Accr-Chr10 37340413 37346985 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01410 208 693 Calmodulin-binding Proteins AT2G36910 33.131 1.04e-70 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01410 - - gmx:100775951 1064.68