Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01402 ATGGCTTCCTTTAACCTCCTTCCTTCTCTAGCTCATCTCTCTATGCTGGCCACTTTATTTGTTACATCGTTTTCCTTTCAAACTTCCATCAAAACAGCTTATATGGTCTCTTTTAAATGCTCTTCAAAAATCAACACATGTAATGCCTTACTCTACCACATAAATCATGGTCTTGACATAGAACACATAGCCTCTCTTTACTCTGTTAACCCATCCCAAATCCAACCAATAACACGGGCCGCCAACCGCGACTACCTAATTACCGTTCCTTGTTCTTGTAAAACCCTCAATAACCTTAGGGGATATTTCTTTGAGACAACATACACAGTGGAGCAAAATGATACGTATGTGAGAATTTCAGAGTTTTATTACAGTGGACAAGCCTGGTCTCCTACTGATGATCATTTGACCATCGGCGAAAACTTAACAATACATCTTCCCTGTGGGTGTACAGAAAGTGATTCTCAAATTGTTGTGACATATACAGTCCAGCAGCATGATACAGTAGAAGAAATAGCTAATCTGTTATCATCTACACCTACTGGCATTCAGAACATGAATGAAATTTTAGCTAATACGACTTCATTCATAGCTGTGGATTGGGTTTTATATGTTCCTAGGGAGCTCAATGGGATTCCATCTTCAAAAGGAAGCGGAAAGAAACCCAACCATTTTATCATTATTGGTGTCTTAGTGGGTGTGGCATTACTTTCTGTTATCACTCTACTCATTCTTATTCTGTGGAGAAAAAGAGCCACTGAAACCAGCAAAGAAGATACAAAAGCTGTATCAAAAAGATCAGCTTCAAGAGGATTCTCTAAAAGATCAATTTCGAATAGAACTGATCTTTCCTTAAAGAACCATCAATTTCATATAGAAACAATAGAAGAAGTAACATCAATTGACTCAGAAAGACCAGTAACATTTTATCTTGAGGAGATTGAGGAGGCCATAAACAAAGAAAGTAAAATAATAGGAAAGGGTGGATATGGGACTGTGTATTTTGGAATTTTAGGAGATAAGGAGGTTGCCATAAAAGAGATGAGGTCTAATAAATCTAAAGAGTTCTATGCAGAATTGAAGGTCTTATGCAGGATCCATCATATCAACATTGTGGAGTTATTGGGATATGCCAGTGGAGAAGATAACCTCTATTTGGTGTATGAGTATGTTTCAAAAGGATCTCTCAGTGACCATCTTCATAATCCATTTCTAAAAGGTCATGAACCTCTTTCATGGACTGCTAGAGCACAGATTGCTCTGGATGCTGCAAAAGGTCTTGAATACATACATGATTACACAAAAGCACGACACGTGCACCGAGATATCAAGACTAGCAATATTCTTCTTGACAATAAACTCAGAGCCAAGATTGCAGATTTTGGACTAGTAAAGCTGGTAGAACGAACAAATGATGATGATTTTATAGCAACAAGGCTTGTTGGAACACCAGGCTACCTTCCACCAGAAGCTGTGAAGGAGCTTCAGGTGACGTCAAAAACCGACGTTTTTGCATTTGGAGTAGTTTTAGCAGAGCTAGTAACAGGGAAACCTGCTCTGTTTCGTGACAGCCAAGAAAACCCCAAAGTCAGATCGCTTATTTCTGTTATTAATAAAGTGTTTGAAGATGATGATCCAGAGAGTGCTTTGGAGGATATCATAGACAAAAACCTTCGTGATATCTATCCTGTGGAGGATATCTTCAAGATTATAGAAATAGCAGAAAGATGCTTACATGAAGAACCAATAGAGAGGCCAGAAATGAGGGAGATTGTGGTGACACTGTCACAGATTTTGATGTCTTCCACAGAGTGGGAAGCATCACTAGGTGGAAACAGTGAAGTCTTTAGCGGCGTATTTACTGGAAGATGA 1872 0.3884 MASFNLLPSLAHLSMLATLFVTSFSFQTSIKTAYMVSFKCSSKINTCNALLYHINHGLDIEHIASLYSVNPSQIQPITRAANRDYLITVPCSCKTLNNLRGYFFETTYTVEQNDTYVRISEFYYSGQAWSPTDDHLTIGENLTIHLPCGCTESDSQIVVTYTVQQHDTVEEIANLLSSTPTGIQNMNEILANTTSFIAVDWVLYVPRELNGIPSSKGSGKKPNHFIIIGVLVGVALLSVITLLILILWRKRATETSKEDTKAVSKRSASRGFSKRSISNRTDLSLKNHQFHIETIEEVTSIDSERPVTFYLEEIEEAINKESKIIGKGGYGTVYFGILGDKEVAIKEMRSNKSKEFYAELKVLCRIHHINIVELLGYASGEDNLYLVYEYVSKGSLSDHLHNPFLKGHEPLSWTARAQIALDAAKGLEYIHDYTKARHVHRDIKTSNILLDNKLRAKIADFGLVKLVERTNDDDFIATRLVGTPGYLPPEAVKELQVTSKTDVFAFGVVLAELVTGKPALFRDSQENPKVRSLISVINKVFEDDDPESALEDIIDKNLRDIYPVEDIFKIIEIAERCLHEEPIERPEMREIVVTLSQILMSSTEWEASLGGNSEVFSGVFTGR 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01402 623 SUPERFAMILY Protein kinase-like (PK-like) 308 595 IPR011009 -
Accr10g01402 623 ProSiteProfiles Protein kinase domain profile. 319 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g01402 623 FunFam PTI1-like tyrosine-protein kinase 3 391 609 - -
Accr10g01402 623 Gene3D Phosphorylase Kinase; domain 1 290 390 - -
Accr10g01402 623 Pfam LysM domain 161 206 IPR018392 -
Accr10g01402 623 SMART serkin_6 319 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g01402 623 SUPERFAMILY LysM domain 159 206 IPR036779 -
Accr10g01402 623 Gene3D LysM domain 158 206 IPR036779 -
Accr10g01402 623 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 25 619 IPR044812 GO:0019199|GO:0045087
Accr10g01402 623 Gene3D Transferase(Phosphotransferase) domain 1 391 612 - -
Accr10g01402 623 Pfam Protein kinase domain 321 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g01402 623 ProSitePatterns Protein kinases ATP-binding region signature. 325 346 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01402 Accr-Chr10 37228612 37232345 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01402 38 623 Receptor kinase-like Gene Family AT1G51940 38.268 7.81e-126 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Accr10g01402 Pkinase 4.2e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01402 - - gmx:100800907 791.571