Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01396 ATGGATATTCCAGATTCTGGGTTTGAATCCCAGGAGCCAAGATTCGCTCTTCCTGTGGATTCTGAACACAAAGCCACAGTGTTCAAACTATTCTCAGTGGCCAAACCCCACATGCGAGCCTTCCATCTTTCATGGATTTCCTTCTTCTCATGCTTTGTCTCCAGTTTCGCAGCTCCACCTCTTCTTCCCATAATTCGCGACAACCTAAACCTCACAGCCACAGACATCGGAAACGCAGGAATCGCTTCAGTTTCTGGTGCAGTTTTCTCTCGAATCGCCATGGGAACTCTCTGTGACTTGTTTGGCCCTCGTCTTGCTTCTTCTTCTCTCATTCTCCTCACAGTACCGGCAGTTTATTGCTCCTCCATTATCTCTTCTCCTACCTCCTTCCTTCTTGTTCGGTTTTTTACAGGCTTCTCTTTAGCCACCTTCGTGTCAACTCAGTTCTGGATGAGTTCTATGTTCTCTACTCGGGTCGTTGCTTCAGCCAATGGACTTGCAGGTGGATGGGGAAACCTAGGAGGAGGAGCCACACAGCTTGTTATGCCTCTCGTTTTTGCACTCATTCGTGATATTGGTGCTGTTAAATTCACAGCATGGCGAATAGCTTTCTTTGTTCCTGCCACGTTTCAGATGTTAACAGCTTTTGCAGTGTTCATATTTGGCCAGGATTTGCCTGATGGGAACTTTAATAACTTAAAGAAATCTGGGGAAAAGCCAAAAGATTCCTTCAAAAAAGTCCTTTTCTTTGGGGTTTCAAATTACAGAGGGTGGATCCTGGCTTTGACTTATGGGTATTGCTTTGGAGTTGAGCTAGCAATAGATAATATCATAGCTGAGTACTTTTATGACAGATTTAATCTGAAACTTCACACAGCAGGGATTATTGCTGCAAGTTCTGGATTGGCTAATATATTTTCTAGACCTGGAGGAGGATATATATCAGATTTAGTGGGAAAGAGGTTTGGAATGAGAGGTAGGCTTTGGGTTTTATGGACGTGTCAAACCATGGGAGGTGTGTTCTGTGTAATTCTTGGAAGGGTGGCTTCTTTAACAGTGTCTATTATCGTGATGATCATATTCTCTATATTTATTCAAGCTGCTTGTGGAATGACATTTGGGGTGGTTCCTTTTGTCTCAAGAAGATCACTGGGAGTGATATCTGGAATGACAGGAGGAGGAGGAAATGTGGGGGCAGTTATAACACAGTTAATATTCTTCAAAGGATCAAAATACTCAAAAGAAACAGGTATCACCTTAATGGGTTTGATGATCATATGTTGTACTCTCCCAATATGTCTCATATACTTCCCACAATGGGGTGGCATGTTTTGTGGGCCATCGTCCAAGAAGCAAGTTTCAGAAAAGGATTACTACTTGTCTGAGTGGAACTCAGTGGAACAAGAGAAAGGGTCCCACCATTCAAGCTTGAAGTTTGCAGATAATAGCAGAAGTGAAAGAGGCATACAAAATGGTGCTCTTTCTACTACTGCAACTAGGCCTTCTGACGATGCCCCGCCACCACATGTTTGA 1533 0.4338 MDIPDSGFESQEPRFALPVDSEHKATVFKLFSVAKPHMRAFHLSWISFFSCFVSSFAAPPLLPIIRDNLNLTATDIGNAGIASVSGAVFSRIAMGTLCDLFGPRLASSSLILLTVPAVYCSSIISSPTSFLLVRFFTGFSLATFVSTQFWMSSMFSTRVVASANGLAGGWGNLGGGATQLVMPLVFALIRDIGAVKFTAWRIAFFVPATFQMLTAFAVFIFGQDLPDGNFNNLKKSGEKPKDSFKKVLFFGVSNYRGWILALTYGYCFGVELAIDNIIAEYFYDRFNLKLHTAGIIAASSGLANIFSRPGGGYISDLVGKRFGMRGRLWVLWTCQTMGGVFCVILGRVASLTVSIIVMIIFSIFIQAACGMTFGVVPFVSRRSLGVISGMTGGGGNVGAVITQLIFFKGSKYSKETGITLMGLMIICCTLPICLIYFPQWGGMFCGPSSKKQVSEKDYYLSEWNSVEQEKGSHHSSLKFADNSRSERGIQNGALSTTATRPSDDAPPPHV 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01396 510 Pfam Major Facilitator Superfamily 45 401 IPR011701 GO:0022857|GO:0055085
Accr10g01396 510 Gene3D MFS general substrate transporter like domains 241 441 IPR036259 -
Accr10g01396 510 MobiDBLite consensus disorder prediction 482 502 - -
Accr10g01396 510 Gene3D MFS general substrate transporter like domains 32 230 IPR036259 -
Accr10g01396 510 FunFam High affinity nitrate transporter 2.5 33 229 - -
Accr10g01396 510 CDD MFS_NRT2_like 41 434 IPR044772 GO:0015112
Accr10g01396 510 MobiDBLite consensus disorder prediction 468 510 - -
Accr10g01396 510 FunFam Nitrate transporter 2.1 241 442 - -
Accr10g01396 510 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 10 491 IPR044772 GO:0015112
Accr10g01396 510 SUPERFAMILY MFS general substrate transporter 33 437 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01396 Accr-Chr10 37119407 37121968 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01396 14 488 Inorganic Solute Cotransporters AT1G12940 74.947 0.0 745
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01396 K02575 - gmx:100787888 809.675