Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01393 ATGTCTGGAACAACCCTTGTGCTTCTTCTACTTTTTCCCTTCGCAATTCCTTCTTTTTCTGATCCAAGAGCTTCAGAAATAGCTGCTATGTGTACAAACAAAACCACACCATTTTCTCAACGCCATATCTTCACAGACAATTTCTTAGCTGCTTTAGACGCCTTAACCCCTTCAATAGCTTGGCAAAGATACGCCTCTGTTATTATCAACAGAACTGGAAATTCCATTGTTTATGCTTTTGCGCAGTGCATGGACGATCTCACTGAATGGGATTGCAATATCTGCTTCGCTCAGATAAAGACTAAAATGCCAAGTTGTTTACCATTTCAGAGAGGGACTCGTGGGGGAAGGGTATTTTATGATGGGTGTTATCTCAGGTACGATGATTACAATTTCTTCAACGAAAGTCTCAGTGATCAAGACAGAACTGTGTGTGGAAGCAAAGATTTTGGTGGAAATCAGAGTGTTTACGAGGCTAATACAATGGAGTTAGTGAGGAATTTGAGTGTGGAAGCACCAAAGAATGATAGGTTCTTTGTGGGTTTTGTGAGAAGAAGTAATGTGACTGTTTATGGTTTGGCTCAGTGCTGGGAATTTGTTAATGGAAGTGCTTGTGAGAGATGTTTGGCAGAAGCTGTTAAGAATATTAGTTCTTGTACTCCAAAAGAAGAAGGGAGAGTTTTGAATGCTGGATGTTTTATGAGGTATTCAACCCAAAAGTTCTATGACAACATAACCAGTCCCTTTGATAGAAAAGGTTATCATTTCTTAGGGAACAACAGCAGTTCAGTTATAATGCTGGCTACTGCATCAAGTGCTGGATCAGCTCTTGTACTGGTTGTTGCAGTAGTTGCTTTCTTTGCAAGGAAGAGGATGCTGAGAAAGAAGAGAGAAAGAAGACAGTTTGGTGCACTTTTGGACAGAGTTTACAAGTCCAAGCTCAATATGACATATGAAGTCCTTGAAAGGGCCACAAATTACTTCAATGCCTCCAATAAGCTTGGACAAGGAGGTTCAGGTTCTGTTTATAAAGGAGTTCTGCCTGATGGGAATATTGTAGCTATAAAAAGGCTTAGCTTTCACACAACACAATGGGTAGATCATTTCTTCAATGAGGTCAATCTGATAAGTGGCATTCATCATAAAAATCTTGTAAGGCTTCTAGGTTGCAGCATTACAGGACCTGAAAGCCTTCTTGTTTATGAATACGTGCCAAACCAAAGCCTCCATGATCACTTTTCTGTGAAGGAAAAATTTCAGCCCTTGACTTGGGAAGCAAGGCGTAAAATCTTATTGGGAACTGCAGAGGGATTGGCCTATCTTCATGAGGAATCACCAGTGAGAATCATTCATAGAGATATTAAACTAAGCAACATTCTGCTTGAAAACGATTTCACACCCAAGATAGCTGATTTTGGACTTGCTAGATTATTTCCAGAAGATGGGACTCACATTAGTACTGCAGTTGCTGGCACGCTTGGTTATATGGCTCCTGAATATGTCGTTCAAGGAAAATTATCAGATAAAGCAGATATTTACAGTTTTGGGGTTCTTCTTATCGAAATCATATCTGGAAAGAGGAGTAGTTCTTTTGTTCTAAATGCATCCTCAATCCTACAAATGGCTTGGAATCTTCATAGGTCAGGCAGGCTATGTGACATGGTAGATCCGAGGCTTGAAGGCAATTATCCAGCCAAGGAAGCATGCCGGCTACTTGAGATAGGGTTGCTTTGCGCACAAGCATCACCGAATCTACGACCATCAATGTCAGAAGTTGTGAGAATGATAACTAGCAATGAGGAAATTCCTGAGCCAACACAACCACCATTTATGGTAGCAAGCAGTGTAGAATGCAGCAAATCTGAATATAATTTTCAGGTTTCATCCAAAACACATTCTTCAGAGGACACTATGACCGAAAGCCTTATTCCTCCAAGATGA 1941 0.4049 MSGTTLVLLLLFPFAIPSFSDPRASEIAAMCTNKTTPFSQRHIFTDNFLAALDALTPSIAWQRYASVIINRTGNSIVYAFAQCMDDLTEWDCNICFAQIKTKMPSCLPFQRGTRGGRVFYDGCYLRYDDYNFFNESLSDQDRTVCGSKDFGGNQSVYEANTMELVRNLSVEAPKNDRFFVGFVRRSNVTVYGLAQCWEFVNGSACERCLAEAVKNISSCTPKEEGRVLNAGCFMRYSTQKFYDNITSPFDRKGYHFLGNNSSSVIMLATASSAGSALVLVVAVVAFFARKRMLRKKRERRQFGALLDRVYKSKLNMTYEVLERATNYFNASNKLGQGGSGSVYKGVLPDGNIVAIKRLSFHTTQWVDHFFNEVNLISGIHHKNLVRLLGCSITGPESLLVYEYVPNQSLHDHFSVKEKFQPLTWEARRKILLGTAEGLAYLHEESPVRIIHRDIKLSNILLENDFTPKIADFGLARLFPEDGTHISTAVAGTLGYMAPEYVVQGKLSDKADIYSFGVLLIEIISGKRSSSFVLNASSILQMAWNLHRSGRLCDMVDPRLEGNYPAKEACRLLEIGLLCAQASPNLRPSMSEVVRMITSNEEIPEPTQPPFMVASSVECSKSEYNFQVSSKTHSSEDTMTESLIPPR 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01393 646 FunFam Cysteine-rich receptor-like protein kinase 2 404 604 - -
Accr10g01393 646 Pfam Salt stress response/antifungal 149 238 IPR002902 -
Accr10g01393 646 Pfam Salt stress response/antifungal 31 130 IPR002902 -
Accr10g01393 646 ProSitePatterns Serine/Threonine protein kinases active-site signature. 449 461 IPR008271 GO:0004672|GO:0006468
Accr10g01393 646 FunFam Cysteine-rich receptor-like protein kinase 3 141 241 - -
Accr10g01393 646 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 78 631 - -
Accr10g01393 646 FunFam Cysteine-rich receptor-like protein kinase 2 294 403 - -
Accr10g01393 646 Gene3D - 141 241 IPR038408 -
Accr10g01393 646 Gene3D - 24 132 IPR038408 -
Accr10g01393 646 ProSiteProfiles Gnk2-homologous domain profile. 25 132 IPR002902 -
Accr10g01393 646 Gene3D Phosphorylase Kinase; domain 1 288 403 - -
Accr10g01393 646 ProSiteProfiles Gnk2-homologous domain profile. 138 241 IPR002902 -
Accr10g01393 646 SUPERFAMILY Protein kinase-like (PK-like) 313 619 IPR011009 -
Accr10g01393 646 MobiDBLite consensus disorder prediction 627 646 - -
Accr10g01393 646 SMART serkin_6 328 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g01393 646 CDD STKc_IRAK 334 597 - -
Accr10g01393 646 ProSiteProfiles Protein kinase domain profile. 328 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g01393 646 ProSitePatterns Protein kinases ATP-binding region signature. 334 356 IPR017441 GO:0005524
Accr10g01393 646 Gene3D Transferase(Phosphotransferase) domain 1 404 607 - -
Accr10g01393 646 Pfam Protein kinase domain 329 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01393 Accr-Chr10 37089234 37092177 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01393 17 493 Receptor kinase-like Gene Family AT1G70530 61.795 0.0 610
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr10g01393 Pkinase 4.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01393 - - qsu:112024219 829.706