Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01392 ATGTCTGGAACAACCCTTGTGCTTCTTCTACTTTTTCCCTTCGCAATTCCTTCTTTTTCTGATCCAAGAGCTTCAGAAATAGCTGCTATGTGTACAAACAAAACCACACCATTTTCTCAACGCCATATCTTCACAGACAATTTCTTAGCTGCTTTAGACGCCTTAACCCCTTCAATAGCTTGGCAAAGATACGCCTCTGTTATTATCAACAGAACTGGAAATTCCATTGTTTATGCTTTTGCGCAGTGCATGGACGATCTCACTGAATGGGATTGCAATATCTGCTTCGCTCAGATAAAGACTAAAATGCCAAGTTGTTTACCATTTCAGAGAGGGACTCGTGGGGGAAGGGTATTTTATGATGGGTGTTATCTCAGGTACGATGATTACAATTTCTTCAACGAAAGTCTCAGTGATCAAGACAGAACTGTGTGTGGAAGCAAAGATTTTGGTGGAAATCAGAGTGTTTACGAGGCTAATACAATGGAGTTAGTGAGGAATTTGAGTGTGGAAGCACCAAAGAATGATAGGTTCTTTGTGGGTTTTGTGAGAAGAAGTAATGTGACTGTTTATGGTTTGGCTCAGTGCTGGGAATTTGTTAATGGAAGTGCTTGTGAGAGATGTTTGGCAGAAGCTGTTAAGAATATTAGTTCTTGTACTCCAAAAGAAGAAGGGAGAGTTTTGAATGCTGGATGTTTTATGAGGTATTCAACCCAAAAGTTCTATGACAACATAACCAGTCCCTTTGATAGAAAAGGGAACAACAGCAGTTCAGTTATAATGCTGGCTACTGCATCAAGTGCTGGATCAGCTCTTGTACTGGTTGTTGCAGTAGTTGCTTTCTTTGCAAGGAAGAGGATGCTGAGAAAGAAGAGAGAAAGAAGACAGTTTGGTGCACTTTTGGACAGAGTTTACAAGTCCAAGCTCAATATGACATATGAAGTCCTTGAAAGGGCCACAAATTACTTCAATGCCTCCAATAAGCTTGGACAAGGAGGTTCAGGTTCTGTTTATAAAGGAGTTCTGCCTGATGGGAATATTGTAGCTATAAAAAGGCTTAGCTTTCACACAACACAATGGGTAGATCATTTCTTCAATGAGGTCAATCTGATAAGTGGCATTCATCATAAAAATCTTGTAAGGCTTCTAGGTTGCAGCATTACAGGACCTGAAAGCCTTCTTGTTTATGAATACGTGCCAAACCAAAGCCTCCATGATCACTTTTCTGTGAAGGAAAAATTTCAGCCCTTGACTTGGGAAGCAAGGCGTAAAATCTTATTGGGAACTGCAGAGGGATTGGCCTATCTTCATGAGGAATCACCAGTGAGAATCATTCATAGAGATATTAAACTAAGCAACATTCTGCTTGAAAACGATTTCACACCCAAGATAGCTGATTTTGGACTTGCTAGATTATTTCCAGAAGATGGGACTCACATTAGTACTGCAGTTGCTGGCACGCTTGGTTATATGGCTCCTGAATATGTCGTTCAAGGAAAATTATCAGATAAAGCAGATATTTACAGTTTTGGGGTTCTTCTTATCGAAATCATATCTGGAAAGAGGAGTAGTTCTTTTGTTCTAAATGCATCCTCAATCCTACAAATGGCTTGGAATCTTCATAGGTCAGGCAGGCTATGTGACATGGTAGATCCGAGGCTTGAAGGCAATTATCCAGCCAAGGAAGCATGCCGGCTACTTGAGATAGGGTTGCTTTGCGCACAAGCATCACCGAATCTACGACCATCAATGTCAGAAGTTGTGAGAATGATAACTAGCAATGAGGAAATTCCTGAGCCAACACAACCACCATTTATGGTAGCAAGCAGTGTAGAATGCAGCAAATCTGAATATAATTTTCAGGTTTCATCCAAAACACATTCTTCAGAGGACACTATGACCGAAAGCCTTATTCCTCCAAGATGA 1926 0.406 MSGTTLVLLLLFPFAIPSFSDPRASEIAAMCTNKTTPFSQRHIFTDNFLAALDALTPSIAWQRYASVIINRTGNSIVYAFAQCMDDLTEWDCNICFAQIKTKMPSCLPFQRGTRGGRVFYDGCYLRYDDYNFFNESLSDQDRTVCGSKDFGGNQSVYEANTMELVRNLSVEAPKNDRFFVGFVRRSNVTVYGLAQCWEFVNGSACERCLAEAVKNISSCTPKEEGRVLNAGCFMRYSTQKFYDNITSPFDRKGNNSSSVIMLATASSAGSALVLVVAVVAFFARKRMLRKKRERRQFGALLDRVYKSKLNMTYEVLERATNYFNASNKLGQGGSGSVYKGVLPDGNIVAIKRLSFHTTQWVDHFFNEVNLISGIHHKNLVRLLGCSITGPESLLVYEYVPNQSLHDHFSVKEKFQPLTWEARRKILLGTAEGLAYLHEESPVRIIHRDIKLSNILLENDFTPKIADFGLARLFPEDGTHISTAVAGTLGYMAPEYVVQGKLSDKADIYSFGVLLIEIISGKRSSSFVLNASSILQMAWNLHRSGRLCDMVDPRLEGNYPAKEACRLLEIGLLCAQASPNLRPSMSEVVRMITSNEEIPEPTQPPFMVASSVECSKSEYNFQVSSKTHSSEDTMTESLIPPR 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01392 641 CDD STKc_IRAK 329 592 - -
Accr10g01392 641 FunFam Cysteine-rich receptor-like protein kinase 3 141 241 - -
Accr10g01392 641 MobiDBLite consensus disorder prediction 622 641 - -
Accr10g01392 641 ProSiteProfiles Gnk2-homologous domain profile. 25 132 IPR002902 -
Accr10g01392 641 ProSiteProfiles Protein kinase domain profile. 323 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g01392 641 Gene3D - 141 241 IPR038408 -
Accr10g01392 641 Gene3D - 24 132 IPR038408 -
Accr10g01392 641 Pfam Protein kinase domain 324 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g01392 641 SUPERFAMILY Protein kinase-like (PK-like) 308 614 IPR011009 -
Accr10g01392 641 ProSiteProfiles Gnk2-homologous domain profile. 138 241 IPR002902 -
Accr10g01392 641 SMART serkin_6 323 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g01392 641 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 78 626 - -
Accr10g01392 641 ProSitePatterns Protein kinases ATP-binding region signature. 329 351 IPR017441 GO:0005524
Accr10g01392 641 Pfam Salt stress response/antifungal 149 238 IPR002902 -
Accr10g01392 641 Pfam Salt stress response/antifungal 31 130 IPR002902 -
Accr10g01392 641 Gene3D Transferase(Phosphotransferase) domain 1 399 602 - -
Accr10g01392 641 Gene3D Phosphorylase Kinase; domain 1 283 398 - -
Accr10g01392 641 FunFam Cysteine-rich receptor-like protein kinase 2 289 398 - -
Accr10g01392 641 ProSitePatterns Serine/Threonine protein kinases active-site signature. 444 456 IPR008271 GO:0004672|GO:0006468
Accr10g01392 641 FunFam Cysteine-rich receptor-like protein kinase 2 399 599 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01392 Accr-Chr10 37089234 37092177 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01392 17 488 Receptor kinase-like Gene Family AT1G70530 62.025 0.0 612
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr10g01392 Pkinase 4.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01392 - - qsu:112024219 833.172