Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01391 ATGAAGAAATCTATCCAATTATTCTCTTGTCAATCTCTTATTCTCCTTCTAATCAGATCATTACTACCACTGCTTATGCTACCAGAAACAGTATTAGCAGATCCAAGAACCAAGACAGTGCAAATAATGTGTGGGAGTCAATTAGAGCACAACGTCACAAACTTTGTCACAAATTTTGTTACAACCATGGATGATATCAGTGATCAGATGCGCAATAATGGGTATGGCATAGCAGTTTCAGGGACAGGTCCTGATTCTAACTATGGCCTTGCTCAGTGCTATGGAGATCTTTCTTTACTTGACTGTGTTCTATGTTATGCTGAGGCAAGAACAGTTCTTCCTAAGTGTTTTCCCAGCAATAGTGGTCGCATATACCTTGATGGTTGCTTTATGAGGGCTGAGAATTACAGCTTCTTTGATGAGTACAAAGGAGCACAAGACAGGGCTGTGTGTGGAAACACAACTGGAAAAAGCTCAAGTTTTCAGGCGACGGTGAGGCGGGCGCTTCTGAGTGCAGTTGAAGCTGCAACAAATAATAAAGGGTTTGCCAGGGAGAGTGTTGCTGTATCAGGAACAACAAATGAGTCAGCTCATGTTTTGGCTAATTGTTGGAGAAGTTTGAACACAAGCTCTTGTAAAGCATGCCTTGAAGATGCATCTTCGTCTATATTAGGATGCTTGCCCTCCTCAGAAGGAAGAGCTACCAACACTGGCTGCTTCATGAGGTATTCAGACAAAAATTTTCTGAACCGTGAACTGGAAAGTGGAAGTTCATCAGGTAATCTGATAGTTCTATTGGTAGCAATTGTCAGTTCAGTTATTGTTTTTGTGGTTGCAATCGCCATTGGGGTTTATGTCTGGAAGCAGAGATACATTCAAATGAAACGAAGAGAAGGTTCAAATGATGTGGAGAAGTTAGCAAAGACCCTTCATCACAACAGCTTGAACTTCAAGTACTCTACCCTGGAGAGGGCAACTGACTCTTTCGATGTTGCGAACAAGCTTGGACAAGGAGGGTTTGGGACAGTTTACAAAGGAATTTTGCCTGATGGAAGAGAGATTGCAGTAAAGAGGTTATATTTTAACAACAGACATAGAGCAGAAGATTTCTATAATGAAGTCAACATAATCAGCAGTGTGGAACATAAAAATCTAGTCAGATTGTTAGGATGCAGTTGTTCAGGACCTGAAAGCCTTCTTGTATATGAGTATCTACCCAACAAGAGTCTTGATCGTTTCATTTTTGATAAAAACAGAGGCAAGGAACTAAACTGGGATAGGAGATATGAAATTATCATTGGGACCGCAGAAGCATTAGTCTACCTGCATGAGAAGTCCAAGATTAAGATAATTCACAGAGATATAAAAGCCAGCAATATCTTATTGGACACAAGGCTTCGAGCGAAAATTGCAGATTTTGGTTTGGCTAGGTCTTTCCAAGAAGACAAAAGTCACATCAGTACAGCTATTGCAGGAACTTTAGGGTATATGGCCCCAGAGTACCTAGCTCATGGTCAATTAACAGAGAAAGCAGATGTATATAGTTTTGGAGTGTTGCTACTGGAAATAGTTACCGGGAGACTGAACAACAGAAGCAAAGCATTAGAATATTCAGACAGCCTAATCATCGTGACATGGAAGCATTTCCAGGCAGGGACAACGGAACAACTATTCGATCCGAATCTAACATCACAAGAAAACCACAATAACAATGTCAAAGATGCAATTTTAAGAGTGGTTCACATAGGACTTCTATGCACTCAAGAGATTCCTTCATTACGACCAACAATGGCAAAAGCATTAGAGATGCTAACTAAGAAGGAGGAGCAACTACCTGCTCCCTCTAATCCACCCTTCATCGATGAAAGCACAATGGAACTCAAAAACATATATGATGATCCACTCTGTCCTCTCAATGCAGCTGATTCAATCGCTACTATGTCTTACAGCGAATTTTATCCCAGGTGA 1968 0.408 MKKSIQLFSCQSLILLLIRSLLPLLMLPETVLADPRTKTVQIMCGSQLEHNVTNFVTNFVTTMDDISDQMRNNGYGIAVSGTGPDSNYGLAQCYGDLSLLDCVLCYAEARTVLPKCFPSNSGRIYLDGCFMRAENYSFFDEYKGAQDRAVCGNTTGKSSSFQATVRRALLSAVEAATNNKGFARESVAVSGTTNESAHVLANCWRSLNTSSCKACLEDASSSILGCLPSSEGRATNTGCFMRYSDKNFLNRELESGSSSGNLIVLLVAIVSSVIVFVVAIAIGVYVWKQRYIQMKRREGSNDVEKLAKTLHHNSLNFKYSTLERATDSFDVANKLGQGGFGTVYKGILPDGREIAVKRLYFNNRHRAEDFYNEVNIISSVEHKNLVRLLGCSCSGPESLLVYEYLPNKSLDRFIFDKNRGKELNWDRRYEIIIGTAEALVYLHEKSKIKIIHRDIKASNILLDTRLRAKIADFGLARSFQEDKSHISTAIAGTLGYMAPEYLAHGQLTEKADVYSFGVLLLEIVTGRLNNRSKALEYSDSLIIVTWKHFQAGTTEQLFDPNLTSQENHNNNVKDAILRVVHIGLLCTQEIPSLRPTMAKALEMLTKKEEQLPAPSNPPFIDESTMELKNIYDDPLCPLNAADSIATMSYSEFYPR 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01391 655 Pfam Salt stress response/antifungal 151 245 IPR002902 -
Accr10g01391 655 Pfam Salt stress response/antifungal 51 136 IPR002902 -
Accr10g01391 655 SUPERFAMILY Protein kinase-like (PK-like) 313 626 IPR011009 -
Accr10g01391 655 CDD STKc_IRAK 335 606 - -
Accr10g01391 655 ProSiteProfiles Gnk2-homologous domain profile. 143 248 IPR002902 -
Accr10g01391 655 ProSiteProfiles Gnk2-homologous domain profile. 37 138 IPR002902 -
Accr10g01391 655 ProSitePatterns Serine/Threonine protein kinases active-site signature. 450 462 IPR008271 GO:0004672|GO:0006468
Accr10g01391 655 Gene3D Phosphorylase Kinase; domain 1 289 404 - -
Accr10g01391 655 Gene3D Transferase(Phosphotransferase) domain 1 405 616 - -
Accr10g01391 655 FunFam Cysteine-rich receptor-like protein kinase 3 147 248 - -
Accr10g01391 655 ProSitePatterns Protein kinases ATP-binding region signature. 335 357 IPR017441 GO:0005524
Accr10g01391 655 Gene3D - 36 138 IPR038408 -
Accr10g01391 655 Gene3D - 148 248 IPR038408 -
Accr10g01391 655 ProSiteProfiles Protein kinase domain profile. 329 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g01391 655 Pfam Protein tyrosine and serine/threonine kinase 331 602 IPR001245 GO:0004672|GO:0006468
Accr10g01391 655 SMART serkin_6 329 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g01391 655 FunFam Cysteine-rich receptor-like protein kinase 2 405 612 - -
Accr10g01391 655 FunFam Putative DUF26-domain receptor-like protein kinase family protein 294 404 - -
Accr10g01391 655 FunFam Cysteine-rich receptor-like protein kinase 2 37 138 - -
Accr10g01391 655 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 88 628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01391 Accr-Chr10 37082227 37085429 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01391 13 655 Receptor kinase-like Gene Family AT1G70520 64.806 0.0 844
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr10g01391 PK_Tyr_Ser-Thr 5.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01391 - - gmx:100818343 983.786