Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01384 ATGGCAACTACTGGTTCGGTTTTCTGGTTTCTGAGTTTCCTGCTTCTGGCGTCGATGGAGATTTCTTCTGCCACGCTTTCTCCTTCTGGGATAAATTATGAAGTTGTCGCTCTGATGGCCATAAAAAATGAATTACATGATCCCCACAATGTCCTGGAAAGTTGGGATATTAATTCTGTCGATCCTTGTAGCTGGAGGATGATTACTTGTACCCCAGATGGCTCCGTCTCTTCTTTAGGATTGCCCAGTCAGAACTTGTCTGGCAAGCTATCTCCGGGGATTGGAAATCTGACTAACTTGCAATCTGTGTTACTTCAGAACAATGCCATTTCCGGCTCAATTCCCGCTGCCATCGGAAAGCTGGAAAAGCTTCAGACACTTGATCTTTCCAATAACACATTTAGCGGTGAGATACCTAGTTCTCTGGGGAGCCTCAAGAACCTGCATTATCTGCGGTTGAATAATAATAGCCTTTCGGGATCCTGCCCTCAGTCTCTTAGGAACATTGAAGGTTTAACCCTTGTGGATCTCTCTTATAACAATCTGAGTGGTTCGTTGCCAAGAATATCAGCAAGAACATTCAAGATTGTGGGCAACTCTTTAATTTGTGGTCCAAATGCTAATAATAACTGCTCCAATGTTTTGCCGGAGCCACTCTCCTTCCCGCCAGATTCTTTAAGAGCATATGGAACGAAGAGTCATCGTGTTGCAGTTGCTTTTGGGGCAAGTTTTGGGGCTGCTTTTGTGATTGTGATTATTGCTGTATTTATTGTTTGGTTGCGGTACAGACACAACAAACAGATATTCTTTGATGTTAATGAGCAATACGACCCAGAGGTGCGCCTTGGCCATTTGAAAAGGTATACATTCAAAGAACTTCGAGCTGCAACAGATCATTTCAATTCAAAGAACATTCTCGGACGGGGTGGCTTTGGAATAGTCTACAAAGGGCGCTTCAATGATGGCTCTGTTGTAGCAGTGAAAAGGTTGAAGGACTATAATGCTGGTGGTGGTGAGATCCAATTTCAAACAGAAGTTGAGACCATAAGTTTGGCTGTTCACCGGAATCTCTTGAGACTTTGTGGGTTTTGCAGTACTGAAAACGAAAGGCTTCTTGTTTATCCATATATGCCTAATGGCAGTGTAGCCTCCCGATTAAAAGATCATATTCATGGTCGACCAGCCTTAGATTGGGTGAGGAGGAAAAGAATAGCTTTGGGTACGGCAAGAGGGTTAGTTTACTTGCACGAGCAGTGTGACCCTAAAATCATTCACCGTGATGTAAAAGCAGCCAACATATTGTTGGATGAAGACTTTGAAGCAGTTGTCGGTGATTTTGGTCTGGCAAAGCTTCTAGATCACAGAGAATCTCATGTAACTACTGCTGTGCGTGGCACTGTTGGTCACATTGCTCCAGAGTATTTATCTACAGGCCAGTCATCAGAAAAGACTGATGTGTTTGGTTTTGGGATATTACTGCTCGAGCTTATCACAGGTCATAAGGCTTTGGATTTTGGGCGAGCAGCCAACCAGAAAGGTGTAATGCTTGATTGGGTTAAGAAGCTACATCAAGAAGGAAGATTGAGTCAAATGGTTGACAAAGATATGAAGGGAAACTTTGATGCAGATGAACTGGAAGAAATGGTTCAGGTTGCACTGTTATGTACACAATTTAATCCTCTGCACAGACCTAAGATGTCAGAAGTTTTGAAGATGTTGGAGGGAGATGGCTTGGCTGAGAGATGGGAGGAAGCTTCACAGAAGACAGAGACAAGGTTCAGGTCTTTTGAAAACCCTCCTCAAAGATACTCAGACTATATAGAAGAATCTTCACTCATACTTGAAGCTATGGAGCTTTCTGGCCCCAGGTGA 1872 0.4338 MATTGSVFWFLSFLLLASMEISSATLSPSGINYEVVALMAIKNELHDPHNVLESWDINSVDPCSWRMITCTPDGSVSSLGLPSQNLSGKLSPGIGNLTNLQSVLLQNNAISGSIPAAIGKLEKLQTLDLSNNTFSGEIPSSLGSLKNLHYLRLNNNSLSGSCPQSLRNIEGLTLVDLSYNNLSGSLPRISARTFKIVGNSLICGPNANNNCSNVLPEPLSFPPDSLRAYGTKSHRVAVAFGASFGAAFVIVIIAVFIVWLRYRHNKQIFFDVNEQYDPEVRLGHLKRYTFKELRAATDHFNSKNILGRGGFGIVYKGRFNDGSVVAVKRLKDYNAGGGEIQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLKDHIHGRPALDWVRRKRIALGTARGLVYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRESHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGHKALDFGRAANQKGVMLDWVKKLHQEGRLSQMVDKDMKGNFDADELEEMVQVALLCTQFNPLHRPKMSEVLKMLEGDGLAERWEEASQKTETRFRSFENPPQRYSDYIEESSLILEAMELSGPR 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01384 623 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 9 584 - -
Accr10g01384 623 SMART serkin_6 300 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g01384 623 FunFam Somatic embryogenesis receptor kinase 1 269 376 - -
Accr10g01384 623 Gene3D Phosphorylase Kinase; domain 1 269 376 - -
Accr10g01384 623 Gene3D Transferase(Phosphotransferase) domain 1 377 593 - -
Accr10g01384 623 Pfam Leucine rich repeat 98 158 IPR001611 GO:0005515
Accr10g01384 623 SUPERFAMILY Protein kinase-like (PK-like) 277 574 IPR011009 -
Accr10g01384 623 SUPERFAMILY L domain-like 32 199 - -
Accr10g01384 623 ProSitePatterns Protein kinases ATP-binding region signature. 306 328 IPR017441 GO:0005524
Accr10g01384 623 Pfam Protein kinase domain 301 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g01384 623 Pfam Leucine rich repeat N-terminal domain 32 70 IPR013210 -
Accr10g01384 623 ProSiteProfiles Protein kinase domain profile. 300 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g01384 623 ProSitePatterns Serine/Threonine protein kinases active-site signature. 423 435 IPR008271 GO:0004672|GO:0006468
Accr10g01384 623 Gene3D Ribonuclease Inhibitor 31 213 IPR032675 -
Accr10g01384 623 FunFam Somatic embryogenesis receptor-like kinase 1 377 593 - -
Accr10g01384 623 FunFam Putative LRR receptor-like serine/threonine-protein kinase 31 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01384 Accr-Chr10 36958998 36963292 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01384 67 623 Receptor kinase-like Gene Family AT1G60800 76.408 0.0 830
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Accr10g01384 Pkinase 1.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01384 - - gmx:100784164 1066.6