Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01374 ATGTCAACACTAAACGAGCTTCATCTTCAGGAACGGTTATGTTACGTGCAATGTGGATTCTGCAGCACCATGTTACTGGTAAGTGTTCCATGTAGCAGTTTATCAATGGAGGTGACTGTGAGGTGTGGAAATTGCACAAACCTTCTCTCTGTTAATATGATGAAAGCTTCGTTTGTCCCTTTTCAACTCTTTCCTTCTTTCCAGCTTACTTGTCTTGATCAGCCCAAAGAAGGAAGTCCAGAAGAAAATGCAGAAAAGAGTAATTGTTCTGATAGTGGGGAAGATGATGCAATAATTCCAATGAGTCCTGCTATTAATGAAAACCCAGCTGAGAGAAGACGAAAAACACCATCGGCTTATAATCGCTTCGTCAGAGAAGAGATCAGAAGGCTGAAGACTCAAAACCCAAACATGGTCCACAAGGAAGCCTTCAGAACAGCAGCCAAAAATTGGGCCAATTTCCCTCAAGCTCAATCTAAAGGACATGAAGAGAGCTGCAGCCATGTGGACCCACATGAAGATGCTGAGGAGGAGGATCATGCAAATCATAGTAATTTCAAAAGCATCAGTACAATGTAA 579 0.4214 MSTLNELHLQERLCYVQCGFCSTMLLVSVPCSSLSMEVTVRCGNCTNLLSVNMMKASFVPFQLFPSFQLTCLDQPKEGSPEENAEKSNCSDSGEDDAIIPMSPAINENPAERRRKTPSAYNRFVREEIRRLKTQNPNMVHKEAFRTAAKNWANFPQAQSKGHEESCSHVDPHEDAEEEDHANHSNFKSISTM 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01374 192 Pfam YABBY protein 9 158 IPR006780 GO:0007275
Accr10g01374 192 MobiDBLite consensus disorder prediction 151 192 - -
Accr10g01374 192 SUPERFAMILY HMG-box 109 158 IPR036910 -
Accr10g01374 192 Gene3D High mobility group box domain 104 188 IPR036910 -
Accr10g01374 192 MobiDBLite consensus disorder prediction 163 184 - -
Accr10g01374 192 MobiDBLite consensus disorder prediction 75 119 - -
Accr10g01374 192 PANTHER PROTEIN YABBY 6-RELATED 1 167 IPR006780 GO:0007275
Accr10g01374 192 MobiDBLite consensus disorder prediction 78 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01374 Accr-Chr10 36870437 36872165 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01374 2 160 C2C2-YABBY Transcription Factor Family AT1G23420 50.857 5.44e-49 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Accr10g01374 YABBY 2.1e-51 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01374 K25796 - qsa:O6P43_025277 209.149