Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01357 ATGAATTCTAGCGATGAAACGAACGAGGATTCACCGTCTCCAGAAGGATCGCCTCCTCAAACGGCAAACATTAATTTGGCGAGCCTCTCGCATGGAGACAAAAAGTCGGCACCGGCACCGGCACCTCCAAAGTCGGAAAAGGGTTCGGATACGGACGACGCTCCGCCGCCGAAGTCTATTGATTCAATCTCATCATTGAAGACACCACCATCGCCGTCTAAGGCTACTCTGATTCTGCCAAGCTCACCATCACCTAAAGAATCACCTTCCAAGAAATCACTCCCACCGCCTCCTCCACCGGTAGCATCACCACCTCCTCCATCGATAACACCGCCACCTCCTTCATCAGTAAAGCAATCGCCTCATTCACCACCGCCGCCGCCGCCACCCCCTACACCACCTCCACCCTCACTCTCGCAACCTCCAACCTCTTCGCCATCGCCACCGCCGCCACCATTATCGAGTAATGGGGAAAATGTCTCCCCCGGCCCCATTGAACAGTCAGCATCATCATCAGGTTCACAGGAGCGGTCTTCTTCGAATATCTCTTCTAATAACTCACCACCACCGCAACCTGCTGTTGCTGTCATTTTCCCCTCTATGACTCAAAGTGCCCCGCCGCCGCCACGAACGCAGGTTGAAGTTTCCAACCATTCTTCACCGCCCCACTCAACAGGACTGAACGCTGGCTCAAATACAAGAACAAGGGGTTCTTCTAACGACTCCGTGCCGTCAACGTCAGGAGGTGACAGTAGTAGTAGCAGCGACAGTAATGCAGCAAAATATGTGGGTATTGCATTCGCGGGAGTCTGTATCATAGTCTTTGTTGGTTTATGTTTTTTGGTGGCGAGAATGAGAAAGAGAAAACGCGGGGCTGTCCATGATGCATCACGTATACCGCCAAATGTGAAAGCATCAGGTGAAGATTGGCGTTACTACGGACTGCAGCCCCCGCAAGATGACCCCTTCAGAAATGGGAGTCAAAGGGGAAATGTGCAACCTTTGGGAACTTCAGAGTCAGTGCAGCCCATGAGTGGTCAGATTGCTTTTAGCTATGAAAGTATTGTGGAAATAACAAATGGGTTTTCTAGTCAAAACATCATAGGAGAGGGGGGATTTGGGTGTGTTTACAAGGGTTGGCTGGCAGATGGAAGAGTTGTAGCAGTCAAGAAGCTGAAGGCAGGCAGCGGACAAGGCGACCGGGAATTCAGGGCAGAAGTGGAGATTATCAGCCGTGTTCATCATCGACATTTGGTATCGCTTGTGGGCTATTGCATATCTGAGCACCAGAAGATTCTTATGTATGAGTTTGTTCCCAATGGAACGCTCAATCATCACTTGCATGCTGGAAAAGGAATGCTAGTGTTAGATTGGGACAAGAGGGTGAAGATAGCAATTGGTGCCGCTAGAGGCCTGGCATATCTGCACGAGGATTGCCAGCCAAAGATTATCCACAGAGATATAAAGTCAGCAAATATACTTTTGGATGATGCTTATGTGGCAAAGGTTGCAGACTTTGGACTTGCGAGGCTCACAGATGATGCTAATACTCATGTATCAACTCGCGTCATGGGGACCTTTGGGTACATGGCTCCAGAGTATGCAACAAGTGGAAAATTAACAGATAGGTCGGATGTTTTCTCCTTTGGAGTTGTCCTCCTAGAGCTTTTGACTGGAAGGAAGCCAGTTGATCAAACTCAACCACTGGGAGATGAGAGTTTGGTTGAGTGGGCTAGACCTCATCTCATTCATGCAGTTGAGACCGGTGACTTTAGCAAACTAATAGACACAAGGCTTGAAAATCGTTATGTGGAGAGTGAAGTACTTAGAATGATTGAAGCAGCTGCAGCATGTGTTCGCCATTCTGCTCCAAAACGGCCCCGGATGCTTCAGGTTGTGAGAGCCTTAGATTGTGGAAGTGAACTAGTTGACCTATCCAATGGAGTGAAATATGGTCAGAGCACTGTTTATGATTCTGGACAGTATGATGAAGAACTTATGAGATTTAGGATGATGAATGGTGTAAGCTTTGGCAGTTCTAAATTTGATTTGAATGATGAAGTATACTGTTCAAGAGAATTATCCGACTTTCGACGTGCATTTGCCCTGGATAGTTCAGGTGGCGAGTCCAGGCTTCTAGCCACCAGCAAAGGTGGGAGCAGTAGGCAAACGAAGGGATAA 2181 0.4846 MNSSDETNEDSPSPEGSPPQTANINLASLSHGDKKSAPAPAPPKSEKGSDTDDAPPPKSIDSISSLKTPPSPSKATLILPSSPSPKESPSKKSLPPPPPPVASPPPPSITPPPPSSVKQSPHSPPPPPPPPTPPPPSLSQPPTSSPSPPPPPLSSNGENVSPGPIEQSASSSGSQERSSSNISSNNSPPPQPAVAVIFPSMTQSAPPPPRTQVEVSNHSSPPHSTGLNAGSNTRTRGSSNDSVPSTSGGDSSSSSDSNAAKYVGIAFAGVCIIVFVGLCFLVARMRKRKRGAVHDASRIPPNVKASGEDWRYYGLQPPQDDPFRNGSQRGNVQPLGTSESVQPMSGQIAFSYESIVEITNGFSSQNIIGEGGFGCVYKGWLADGRVVAVKKLKAGSGQGDREFRAEVEIISRVHHRHLVSLVGYCISEHQKILMYEFVPNGTLNHHLHAGKGMLVLDWDKRVKIAIGAARGLAYLHEDCQPKIIHRDIKSANILLDDAYVAKVADFGLARLTDDANTHVSTRVMGTFGYMAPEYATSGKLTDRSDVFSFGVVLLELLTGRKPVDQTQPLGDESLVEWARPHLIHAVETGDFSKLIDTRLENRYVESEVLRMIEAAAACVRHSAPKRPRMLQVVRALDCGSELVDLSNGVKYGQSTVYDSGQYDEELMRFRMMNGVSFGSSKFDLNDEVYCSRELSDFRRAFALDSSGGESRLLATSKGGSSRQTKG 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01357 726 FunFam proline-rich receptor-like protein kinase PERK8 438 651 - -
Accr10g01357 726 MobiDBLite consensus disorder prediction 89 157 - -
Accr10g01357 726 FunFam Proline-rich receptor-like protein kinase PERK8 335 437 - -
Accr10g01357 726 ProSiteProfiles Protein kinase domain profile. 362 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g01357 726 MobiDBLite consensus disorder prediction 1 257 - -
Accr10g01357 726 ProSitePatterns Serine/Threonine protein kinases active-site signature. 483 495 IPR008271 GO:0004672|GO:0006468
Accr10g01357 726 Pfam Protein tyrosine and serine/threonine kinase 365 636 IPR001245 GO:0004672|GO:0006468
Accr10g01357 726 ProSitePatterns Protein kinases ATP-binding region signature. 368 391 IPR017441 GO:0005524
Accr10g01357 726 Gene3D Phosphorylase Kinase; domain 1 329 437 - -
Accr10g01357 726 MobiDBLite consensus disorder prediction 207 257 - -
Accr10g01357 726 SMART serkin_6 362 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g01357 726 CDD STKc_IRAK 368 637 - -
Accr10g01357 726 MobiDBLite consensus disorder prediction 158 191 - -
Accr10g01357 726 PRINTS Proline rich extensin signature 40 56 - -
Accr10g01357 726 PRINTS Proline rich extensin signature 118 135 - -
Accr10g01357 726 PRINTS Proline rich extensin signature 100 116 - -
Accr10g01357 726 PRINTS Proline rich extensin signature 78 99 - -
Accr10g01357 726 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 271 673 IPR047117 -
Accr10g01357 726 Gene3D Transferase(Phosphotransferase) domain 1 438 647 - -
Accr10g01357 726 SUPERFAMILY Protein kinase-like (PK-like) 338 636 IPR011009 -
Accr10g01357 726 MobiDBLite consensus disorder prediction 61 88 - -
Accr10g01357 726 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01357 Accr-Chr10 36713130 36718419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01357 216 672 Trihelix Transcription Factor Family AT1G70460 59.792 0.0 563
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Accr10g01357 PK_Tyr_Ser-Thr 4.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01357 - - cave:132179339 612.068