Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01351 ATGAAAGGAGGAGAAGGGAATGAGTACAAGAAGGGACTGTGGACGGCGGAAGAAGACAGGGTTTTGGTGGAATACATTAGGGTTCATGGAAGAACCCACTGGAACCGCATTTCCAAAGTCACTGGTTTAATGAGGAGTGGGAAGAGTTGCAGATTAAGGTGGCTGAACTATCTGAGTCCAAACGTCAAACATGGAAGTTTCTCTGAGGAAGAAGACGATCTCATCATTCGTCTTCATAATCTCCTTGGAAACAGGTGGTCTTTAATAGCAGGAAGGGTGCCTGGAAGAACAGACAACCAAGTAAAGAACCATTGGAACACTCATTTGTGCAAGAAACTTGGTATCACTAAGCGAACCAAAAAACCTATTAAGGACAAGGTTTCTGTGAAACTCAGAGCTTCACAAATAGAAGAGGCTCAAAATGTTCACATGTCTTCGAGTTCAATGGATATCATTCCTCTCACTCTCAACAACAAAGAAGACAAAGAAGCTGAGGTACAATTAGGCCAAGGAAGCTACATGAACAACAATCCCACAACAAACAATATTGATGAATTACAACATTGTTGGCCACCCACAGAATGGGATGATCACCACTTTGATCAAAGTTTTATTTTTGATGATGATCATACTTTTGTTCTACATAGTCCTCCTAGGTTAATGGAAGTTTTGGATGGATTTGACGTAATTTAG 693 0.4084 MKGGEGNEYKKGLWTAEEDRVLVEYIRVHGRTHWNRISKVTGLMRSGKSCRLRWLNYLSPNVKHGSFSEEEDDLIIRLHNLLGNRWSLIAGRVPGRTDNQVKNHWNTHLCKKLGITKRTKKPIKDKVSVKLRASQIEEAQNVHMSSSSMDIIPLTLNNKEDKEAEVQLGQGSYMNNNPTTNNIDELQHCWPPTEWDDHHFDQSFIFDDDHTFVLHSPPRLMEVLDGFDVI 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01351 230 CDD SANT 14 58 IPR001005 -
Accr10g01351 230 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 7 172 - -
Accr10g01351 230 Pfam Myb-like DNA-binding domain 65 109 IPR001005 -
Accr10g01351 230 Pfam Myb-like DNA-binding domain 11 58 IPR001005 -
Accr10g01351 230 SMART sant 63 111 IPR001005 -
Accr10g01351 230 SMART sant 10 60 IPR001005 -
Accr10g01351 230 FunFam MYB-related transcription factor 10 63 - -
Accr10g01351 230 FunFam Transcription factor WER 65 143 - -
Accr10g01351 230 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 6 58 IPR017930 -
Accr10g01351 230 ProSiteProfiles Myb-like domain profile. 6 58 IPR001005 -
Accr10g01351 230 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 59 113 IPR017930 -
Accr10g01351 230 CDD SANT 66 109 IPR001005 -
Accr10g01351 230 ProSiteProfiles Myb-like domain profile. 59 109 IPR001005 -
Accr10g01351 230 Gene3D - 65 141 - -
Accr10g01351 230 Gene3D - 5 64 - -
Accr10g01351 230 SUPERFAMILY Homeodomain-like 9 105 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01351 Accr-Chr10 36649333 36653196 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01351 2 115 MYB Transcription Factor Family AT5G40330 72.807 2.01e-60 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr10g01351 Myb_DNA-binding 5.7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01351 K09422 - cit:102614177 229.95