Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Accr10g01350 | ATGATGAAAGGAGGAGAAGGGAATGAGTACAAGAAGGGACTGTGGACGGCGGAAGAAGACAGGGTTTTGGTGGAATACATTAGGGTTCATGGAAGAACCCACTGGAACCGCATTTCCAAAGTCACTGGTTTAATGAGGAGTGGGAAGAGTTGCAGATTAAGGTGGCTGAACTATCTGAGTCCAAACGTCAAACATGGAAGTTTCTCTGAGGAAGAAGACGATCTCATCATTCGTCTTCATAATCTCCTTGGAAACAGGTGGTCTTTAATAGCAGGAAGGGTGCCTGGAAGAACAGACAACCAAGTAAAGAACCATTGGAACACTCATTTGTGCAAGAAACTTGGTATCACTAAGCGAACCAAAAAACCTATTAAGGACAAGGTTTCTGTGAAACTCAGAGCTTCACAAATAGAAGAGGCTCAAAATGTTCACATGTCTTCGAGTTCAATGGATATCATTCCTCTCACTCTCAACAACAAAGAAGACAAAGAAGCTGAGGTACAATTAGGCCAAGGAAGCTACATGAACAACAATCCCACAACAAACAATATTGATGAATTACAACATTGTTGGCCACCCACAGAATGGGATGATCACCACTTTGATCAAAGTTTTATTTTTGATGATGATCATACTTTTGTTCTACATAGTCCTCCTAGGTTAATGGAAGTTTTGGATGGATTTGACGTAATTTAG | 696 | 0.408 | MMKGGEGNEYKKGLWTAEEDRVLVEYIRVHGRTHWNRISKVTGLMRSGKSCRLRWLNYLSPNVKHGSFSEEEDDLIIRLHNLLGNRWSLIAGRVPGRTDNQVKNHWNTHLCKKLGITKRTKKPIKDKVSVKLRASQIEEAQNVHMSSSSMDIIPLTLNNKEDKEAEVQLGQGSYMNNNPTTNNIDELQHCWPPTEWDDHHFDQSFIFDDDHTFVLHSPPRLMEVLDGFDVI | 231 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Accr10g01350 | 231 | ProSiteProfiles | Myb-like domain profile. | 60 | 110 | IPR001005 | - | |
Accr10g01350 | 231 | FunFam | Transcription factor WER | 66 | 144 | - | - | |
Accr10g01350 | 231 | Pfam | Myb-like DNA-binding domain | 66 | 110 | IPR001005 | - | |
Accr10g01350 | 231 | Pfam | Myb-like DNA-binding domain | 12 | 59 | IPR001005 | - | |
Accr10g01350 | 231 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 7 | 59 | IPR017930 | - | |
Accr10g01350 | 231 | CDD | SANT | 67 | 110 | IPR001005 | - | |
Accr10g01350 | 231 | SMART | sant | 11 | 61 | IPR001005 | - | |
Accr10g01350 | 231 | SMART | sant | 64 | 112 | IPR001005 | - | |
Accr10g01350 | 231 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 60 | 114 | IPR017930 | - | |
Accr10g01350 | 231 | PANTHER | TRANSCRIPTION FACTOR MYB8-RELATED-RELATED | 8 | 173 | - | - | |
Accr10g01350 | 231 | FunFam | MYB-related transcription factor | 11 | 64 | - | - | |
Accr10g01350 | 231 | Gene3D | - | 6 | 65 | - | - | |
Accr10g01350 | 231 | ProSiteProfiles | Myb-like domain profile. | 7 | 59 | IPR001005 | - | |
Accr10g01350 | 231 | SUPERFAMILY | Homeodomain-like | 10 | 106 | IPR009057 | - | |
Accr10g01350 | 231 | CDD | SANT | 15 | 59 | IPR001005 | - | |
Accr10g01350 | 231 | Gene3D | - | 66 | 142 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Accr10g01350 | Accr-Chr10 | 36649330 | 36653196 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Accr10g01350 | 1 | 116 | MYB Transcription Factor Family | AT5G40330 | 72.414 | 3.58e-61 | 189 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Accr10g01350 | Myb_DNA-binding | 5.7e-14 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Accr10g01350 | K09422 | - | cit:102614177 | 229.95 |