Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01350 ATGATGAAAGGAGGAGAAGGGAATGAGTACAAGAAGGGACTGTGGACGGCGGAAGAAGACAGGGTTTTGGTGGAATACATTAGGGTTCATGGAAGAACCCACTGGAACCGCATTTCCAAAGTCACTGGTTTAATGAGGAGTGGGAAGAGTTGCAGATTAAGGTGGCTGAACTATCTGAGTCCAAACGTCAAACATGGAAGTTTCTCTGAGGAAGAAGACGATCTCATCATTCGTCTTCATAATCTCCTTGGAAACAGGTGGTCTTTAATAGCAGGAAGGGTGCCTGGAAGAACAGACAACCAAGTAAAGAACCATTGGAACACTCATTTGTGCAAGAAACTTGGTATCACTAAGCGAACCAAAAAACCTATTAAGGACAAGGTTTCTGTGAAACTCAGAGCTTCACAAATAGAAGAGGCTCAAAATGTTCACATGTCTTCGAGTTCAATGGATATCATTCCTCTCACTCTCAACAACAAAGAAGACAAAGAAGCTGAGGTACAATTAGGCCAAGGAAGCTACATGAACAACAATCCCACAACAAACAATATTGATGAATTACAACATTGTTGGCCACCCACAGAATGGGATGATCACCACTTTGATCAAAGTTTTATTTTTGATGATGATCATACTTTTGTTCTACATAGTCCTCCTAGGTTAATGGAAGTTTTGGATGGATTTGACGTAATTTAG 696 0.408 MMKGGEGNEYKKGLWTAEEDRVLVEYIRVHGRTHWNRISKVTGLMRSGKSCRLRWLNYLSPNVKHGSFSEEEDDLIIRLHNLLGNRWSLIAGRVPGRTDNQVKNHWNTHLCKKLGITKRTKKPIKDKVSVKLRASQIEEAQNVHMSSSSMDIIPLTLNNKEDKEAEVQLGQGSYMNNNPTTNNIDELQHCWPPTEWDDHHFDQSFIFDDDHTFVLHSPPRLMEVLDGFDVI 231
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01350 231 ProSiteProfiles Myb-like domain profile. 60 110 IPR001005 -
Accr10g01350 231 FunFam Transcription factor WER 66 144 - -
Accr10g01350 231 Pfam Myb-like DNA-binding domain 66 110 IPR001005 -
Accr10g01350 231 Pfam Myb-like DNA-binding domain 12 59 IPR001005 -
Accr10g01350 231 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 7 59 IPR017930 -
Accr10g01350 231 CDD SANT 67 110 IPR001005 -
Accr10g01350 231 SMART sant 11 61 IPR001005 -
Accr10g01350 231 SMART sant 64 112 IPR001005 -
Accr10g01350 231 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 60 114 IPR017930 -
Accr10g01350 231 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 8 173 - -
Accr10g01350 231 FunFam MYB-related transcription factor 11 64 - -
Accr10g01350 231 Gene3D - 6 65 - -
Accr10g01350 231 ProSiteProfiles Myb-like domain profile. 7 59 IPR001005 -
Accr10g01350 231 SUPERFAMILY Homeodomain-like 10 106 IPR009057 -
Accr10g01350 231 CDD SANT 15 59 IPR001005 -
Accr10g01350 231 Gene3D - 66 142 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Accr10g01350 Accr-Chr10 36649330 36653196 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01350 1 116 MYB Transcription Factor Family AT5G40330 72.414 3.58e-61 189
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr10g01350 Myb_DNA-binding 5.7e-14 CL0123
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01350 K09422 - cit:102614177 229.95