Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01312 ATGTCGGTTTCCTGCACTGACTACTTCCCCGATTCCGACCTTCTCTGCGACGAGGACACCTCCGGAATCTTGTCCGGAGAGTCGACGGAGTGTTCTTCCGACATCGATTCATCTCCGTGGTCCACGGAAGAGTCGATCGCCGGATTTATCGAACACGAGCGCAGCTTCGTTCCAGGATGCGATTACTTTTCTAGGTTCCAATCCCAATCGCTTGACGCCTCGGCGAGGGAGGAATCTGTTGCATGGATTCTCAAGGTACAAGCTCACTTTGGGTTTCAGCCGCTGACGGCGTATCTTTCCGTCAACTACATGGATCGGTTTTTGGATTCTCGGCAGCTGCCGCAAGCAAATGGGTGGCCACTGCAACTTCTGTCCGTTGCTTGTTTGTCTTTAGCTGCAAAGATGGAAGAACCTTTAGTTCCGGCCCTTGTGGATCTTCAGGTAGAAGGTGCCAAATACATATTTGAGCCGAAAACGATTCGTAGGATGGAACTGCTTGTTCTAGGTGCTTTGGACTGGAGACTAAGATCAGTGACGCCCTTCAACTTCCTCAGTTTCTTTGCGAGCAAGCTCAATTCAGCTGGAACTTTTACTGGCTTCCTTATTTCACGAGCTACAGATATCATCTTATCAAATATCCAAGGGGCTAGTTTTCTTGCGTACTGGCCATCATGCATTGCTGCCGCCTCCATACTCTGTGCAGCAAATGAAATTCCTAATTGGTCTCTCATCAGGCCTGAGCAGGCTGAGTCATGGTGTGATGGGCTTAGAAAAGAGAAGATTATAGGTTGCTACCAGTTCATGCGCGAATTTGTGATTAGCAATAGCCAGACGAAGCCCCCCAAAATGTTCCCACAGCTTCGAGTAACAACGAGGCTAACAACAAAGTCAAGTATGTCATCATACTCATCGCCTTCCTCTTCATCCTCTTCCTCATCACCTTACAAAAGGAGGAAATTAAATAGCTGCCTGTGGGTAGATAATGATGACGACAAAGGACACTCGGAGTGA 1011 0.4827 MSVSCTDYFPDSDLLCDEDTSGILSGESTECSSDIDSSPWSTEESIAGFIEHERSFVPGCDYFSRFQSQSLDASAREESVAWILKVQAHFGFQPLTAYLSVNYMDRFLDSRQLPQANGWPLQLLSVACLSLAAKMEEPLVPALVDLQVEGAKYIFEPKTIRRMELLVLGALDWRLRSVTPFNFLSFFASKLNSAGTFTGFLISRATDIILSNIQGASFLAYWPSCIAAASILCAANEIPNWSLIRPEQAESWCDGLRKEKIIGCYQFMREFVISNSQTKPPKMFPQLRVTTRLTTKSSMSSYSSPSSSSSSSSPYKRRKLNSCLWVDNDDDKGHSE 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01312 336 SUPERFAMILY Cyclin-like 160 282 IPR036915 -
Accr10g01312 336 ProSitePatterns Cyclins signature. 76 107 IPR006671 -
Accr10g01312 336 MobiDBLite consensus disorder prediction 295 317 - -
Accr10g01312 336 Pfam Cyclin, N-terminal domain 48 175 IPR006671 -
Accr10g01312 336 SUPERFAMILY Cyclin-like 37 175 IPR036915 -
Accr10g01312 336 Pfam Cyclin, C-terminal domain 178 288 IPR004367 -
Accr10g01312 336 SMART cyclin_7 81 169 IPR013763 -
Accr10g01312 336 Gene3D - 59 176 - -
Accr10g01312 336 SMART Cyclin_C_2 178 315 IPR004367 -
Accr10g01312 336 FunFam D2/4-type cyclin 59 176 - -
Accr10g01312 336 CDD CYCLIN_AtCycD-like_rpt1 75 173 - -
Accr10g01312 336 Gene3D - 50 239 - -
Accr10g01312 336 CDD CYCLIN_AtCycD-like_rpt2 178 268 - -
Accr10g01312 336 PANTHER CYCLINS 44 276 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01312 Accr-Chr10 36111526 36114028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01312 1 329 Core Cell Cycle Gene Families AT1G70210 62.763 6.06e-135 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01312 K18810 - qsa:O6P43_025341 483.796