Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01299 ATGGAAAGAGAACATGGCTGTGATACTTCTCCTTCATGGGATAATAATGGGGAAAATGGCCATTCTTCTGTGGAGAAGAGGCTGAGGTTATTTGGGTTTGAGCTGAACCCATCTCAGATCAACGAGGCCTGTGTCAAAGACTCTGTGGAAGCATACGAAGAAAGTGCGAACTCTTCGAACTCGGTTTCATCAGGAGGGGAGAAACCTGAGCAGCAGGAGAAGAGTTCATCTGCAACAAGAGACAACACATCAGATCATGAAAGAAAGTTCGAGTGCCAATATTGTTCGAAGGAATTCGCAAACTCGCAAGCGTTAGGAGGTCACCAGAATGCTCACAAGAAAGAGAGAATGAAGAAAAAGAGGTTGCAGCTTCAAGCGAGGAAGGCTAGCTTAAGCTACTACCTTCATCCTTTTCAGAACAACCGTGGTTTTTCCTTCCACGGCTCTAATACGCCTTGGTTCTATGACCCCTCTACTTATAACTACTCTGAGTTTTCTTTGTATGAAGAACCTCAGATTAGCTTCAAAACCAATGATCAAGATGCCGTTAATATTCTTAATGGTTTTGATCAGAAATCAAATTGGAATAATTCATCATCCCTTTCCCTTCCTTCTAAACAGGATACTTGTATGTTCACTTTATCACATGCAGATCATAATAGGCCTTTCAACTTCCCTGCAGCTTCAAACCAGAGCCATAGTAATAAGGGTTTGGATCTTCAACTAGGCCTCACTTTGCAGTCAAATACACATAATTTAGCATAG 765 0.4196 MEREHGCDTSPSWDNNGENGHSSVEKRLRLFGFELNPSQINEACVKDSVEAYEESANSSNSVSSGGEKPEQQEKSSSATRDNTSDHERKFECQYCSKEFANSQALGGHQNAHKKERMKKKRLQLQARKASLSYYLHPFQNNRGFSFHGSNTPWFYDPSTYNYSEFSLYEEPQISFKTNDQDAVNILNGFDQKSNWNNSSSLSLPSKQDTCMFTLSHADHNRPFNFPAASNQSHSNKGLDLQLGLTLQSNTHNLA 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01299 254 Gene3D Classic Zinc Finger 65 140 - -
Accr10g01299 254 ProSiteProfiles Zinc finger C2H2 type domain profile. 90 117 IPR013087 -
Accr10g01299 254 ProSitePatterns Zinc finger C2H2 type domain signature. 92 112 IPR013087 -
Accr10g01299 254 MobiDBLite consensus disorder prediction 1 22 - -
Accr10g01299 254 MobiDBLite consensus disorder prediction 49 85 - -
Accr10g01299 254 SUPERFAMILY beta-beta-alpha zinc fingers 86 117 IPR036236 -
Accr10g01299 254 PANTHER ZINC FINGER PROTEIN 5 19 247 IPR044299 GO:0010090
Accr10g01299 254 Pfam C2H2-type zinc finger 90 115 - -
Accr10g01299 254 MobiDBLite consensus disorder prediction 52 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01299 Accr-Chr10 35915047 35915811 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01299 27 128 C2H2 Transcription Factor Family AT1G68360 40.367 2.17e-16 74.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Accr10g01299 zf-C2H2_6 2.8e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01299 - - qsa:O6P43_033118 257.299