Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01294 ATGGAGGTCTGTGATCTCTTGCCAGCAGATTCTGACGAGGTTCATGTCTTGGCCGTCGATGACAGCCTCGTCGATCGGAAAGTCATCGAGCGCTTGCTCAGGATTTCAGCTTGTAAAGTCACTGCTGTGGACAGTGGAATTCGAGCTCTGCAATTCCTTGGACTCGACGACCAGAAATCTCCTTCCGAATCGGACGGCTTTGATGGCTTAAAGGTGGATCTAATCATCACTGACTACTGCATGCCTGGAATGACCGGCTATGAATTACTCAAGAAAATCAAGGAATCATCCACCTTCAGAGAAATTCCAGTGGTGATCATGTCCTCTGAGAACGTTTTGCCCCGAATAGACAGGTGTTTGGAAGAAGGGGCAGAGGATTTCATAGTGAAGCCAGTGAAGTTATCAGACGTGAAGCGGTTAAGGGATTCCATGACGACAAGAGAGAGAGAAGTTAAGGCGGGAAATCAAGAGAGAGAAGGCGGCGTCAGGTTCACCAAAAGGAAGCTCACGGAATCTTCTGATCTGGATTCATCGCCGCCGTCCGTTACATCCTCATCGGCTCTGTCATCGTCGCCGTCGTCGCCATCAGATTCTGCTTCGCCATCGTCATCCCCTTCACCTTCGCCTTCCCCACTCGACTCTCCGATCAGACGGCTTAGAATGACCACCACCGATTGA 678 0.5044 MEVCDLLPADSDEVHVLAVDDSLVDRKVIERLLRISACKVTAVDSGIRALQFLGLDDQKSPSESDGFDGLKVDLIITDYCMPGMTGYELLKKIKESSTFREIPVVIMSSENVLPRIDRCLEEGAEDFIVKPVKLSDVKRLRDSMTTREREVKAGNQEREGGVRFTKRKLTESSDLDSSPPSVTSSSALSSSPSSPSDSASPSSSPSPSPSPLDSPIRRLRMTTTD 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01294 225 ProSiteProfiles Response regulatory domain profile. 15 145 IPR001789 GO:0000160
Accr10g01294 225 MobiDBLite consensus disorder prediction 142 225 - -
Accr10g01294 225 MobiDBLite consensus disorder prediction 142 173 - -
Accr10g01294 225 CDD REC_typeA_ARR 16 140 - -
Accr10g01294 225 Pfam Response regulator receiver domain 16 137 IPR001789 GO:0000160
Accr10g01294 225 PANTHER TWO-COMPONENT RESPONSE REGULATOR 14 181 IPR045279 GO:0009736
Accr10g01294 225 MobiDBLite consensus disorder prediction 174 201 - -
Accr10g01294 225 SMART REC_2 14 141 IPR001789 GO:0000160
Accr10g01294 225 Gene3D - 14 188 - -
Accr10g01294 225 SUPERFAMILY CheY-like 14 145 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01294 Accr-Chr10 35708061 35709103 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01294 8 215 Response Regulator Gene Family AT1G59940 63.942 2.53e-80 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Accr10g01294 Response_reg 3.4e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01294 K14492 - cave:132178602 256.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr10g01294 10 35708061 35709103 Accr12g00597 12 5620941 5622551 ECH
Accr10g01294 10 35708061 35709103 Accr10g01294 10 35708061 35709103 ECH