Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01284 ATGCCTCGCACGTGCTCACAGGGTGGCAGCACCGGCCACAACTTCCGAACATACGTCGACGGCGGAGCCGGCAAGAACAGTATATTACTGTTCGGGGTGCGAGTCACGCAAGGGAACTCGTTCAGGAAGAGCGCTAGCATGACCGATCTATCGCAGTACGATCAGCCGCTGCCTCATGATTCCAACGCCGACGCCGGTTATGCCTCCGATGATGTCGTTCACGCTTCTGGTCATAGCCGCGAGCGAAAGAGAGGTATTCCATGGACGGAGGAGGAGCATAGGCTATTCCTGTTGGGGCTTCAGCAGGTAGGTAAAGGTGATTGGAGAGGTATTTCTAGAAACTTCGTGAAAACTCGTACACCAACTCAGGTGGCCAGTCATGCTCAGAAGTACTTCCTCCGCCGCCATAACCAAAATCGGAGACGCCGGAGATCTAGTCTGTTTGATATTACCGCCACAGATACGGTGACGGAATCGTCAACAACAATGGAAGAAGGGACAGTCCACACAGAACCATCAGTACCGCCCAAATATCCTCATTACAGTGGCTTTGGCATTGGCAGTTCATCTTTTCAGATGATGCCGTCACCGCCGTTGACACCAGTGGGAGCTAAGCTGATGAGGCCTACACGGATCCTGCCAGTTGCTCCATCTTCGAAAATGGCAAAATTAAGGTTCTCTTCCGCCGAGCAAGGAGAAGTCATCGTCGGTGGCTTTTGA 720 0.5278 MPRTCSQGGSTGHNFRTYVDGGAGKNSILLFGVRVTQGNSFRKSASMTDLSQYDQPLPHDSNADAGYASDDVVHASGHSRERKRGIPWTEEEHRLFLLGLQQVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRHNQNRRRRRSSLFDITATDTVTESSTTMEEGTVHTEPSVPPKYPHYSGFGIGSSSFQMMPSPPLTPVGAKLMRPTRILPVAPSSKMAKLRFSSAEQGEVIVGGF 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01284 239 SMART sant 84 134 IPR001005 -
Accr10g01284 239 Pfam Myb-like DNA-binding domain 87 132 IPR001005 -
Accr10g01284 239 CDD SANT 87 132 IPR001005 -
Accr10g01284 239 ProSiteProfiles SANT domain profile. 88 136 IPR017884 -
Accr10g01284 239 Gene3D - 86 137 - -
Accr10g01284 239 NCBIfam myb-like DNA-binding domain, SHAQKYF class 83 134 IPR006447 GO:0003677
Accr10g01284 239 PANTHER TRANSCRIPTION FACTOR KUA1 3 185 - -
Accr10g01284 239 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 80 136 IPR017930 -
Accr10g01284 239 FunFam transcription factor MYB1R1 86 137 - -
Accr10g01284 239 ProSiteProfiles Myb-like domain profile. 80 132 IPR001005 -
Accr10g01284 239 SUPERFAMILY Homeodomain-like 82 135 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01284 Accr-Chr10 35480743 35481803 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Accr10g01284 Myb_DNA-binding 2.2e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01284 - - jre:109008681 266.929