Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01283 ATGATGCCTCGCACGTGCTCACAGGGTGGCAGCACCGGCCACAACTTCCGAACATACGTCGACGGCGGAGCCGGCAAGAACAGTATATTACTGTTCGGGGTGCGAGTCACGCAAGGGAACTCGTTCAGGAAGAGCGCTAGCATGACCGATCTATCGCAGTACGATCAGCCGCTGCCTCATGATTCCAACGCCGACGCCGGTTATGCCTCCGATGATGTCGTTCACGCTTCTGGTCATAGCCGCGAGCGAAAGAGAGGTATTCCATGGACGGAGGAGGAGCATAGGCTATTCCTGTTGGGGCTTCAGCAGGTAGGTAAAGGTGATTGGAGAGGTATTTCTAGAAACTTCGTGAAAACTCGTACACCAACTCAGGTGGCCAGTCATGCTCAGAAGTACTTCCTCCGCCGCCATAACCAAAATCGGAGACGCCGGAGATCTAGTCTGTTTGATATTACCGCCACAGATACGGTGACGGAATCGTCAACAACAATGGAAGAAGGGACAGTCCACACAGAACCATCAGTACCGCCCAAATATCCTCATTACAGTGGCTTTGGCATTGGCAGTTCATCTTTTCAGATGATGCCGTCACCGCCGTTGACACCAGTGGGAGCTAAGCTGATGAGGCCTACACGGATCCTGCCAGTTGCTCCATCTTCGAAAATGGCAAAATTAAGGTTCTCTTCCGCCGAGCAAGGAGAAGTCATCGTCGGTGGCTTTTGA 723 0.527 MMPRTCSQGGSTGHNFRTYVDGGAGKNSILLFGVRVTQGNSFRKSASMTDLSQYDQPLPHDSNADAGYASDDVVHASGHSRERKRGIPWTEEEHRLFLLGLQQVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRHNQNRRRRRSSLFDITATDTVTESSTTMEEGTVHTEPSVPPKYPHYSGFGIGSSSFQMMPSPPLTPVGAKLMRPTRILPVAPSSKMAKLRFSSAEQGEVIVGGF 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01283 240 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 81 137 IPR017930 -
Accr10g01283 240 NCBIfam myb-like DNA-binding domain, SHAQKYF class 84 135 IPR006447 GO:0003677
Accr10g01283 240 Gene3D - 87 138 - -
Accr10g01283 240 SUPERFAMILY Homeodomain-like 83 136 IPR009057 -
Accr10g01283 240 ProSiteProfiles Myb-like domain profile. 81 133 IPR001005 -
Accr10g01283 240 FunFam transcription factor MYB1R1 87 138 - -
Accr10g01283 240 Pfam Myb-like DNA-binding domain 88 133 IPR001005 -
Accr10g01283 240 ProSiteProfiles SANT domain profile. 89 137 IPR017884 -
Accr10g01283 240 PANTHER TRANSCRIPTION FACTOR KUA1 3 186 - -
Accr10g01283 240 CDD SANT 88 133 IPR001005 -
Accr10g01283 240 SMART sant 85 135 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01283 Accr-Chr10 35480743 35481806 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Accr10g01283 Myb_DNA-binding 2.2e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01283 - - jre:109008681 266.929