Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01281 ATGAACTTTATCTTTCTCACTGTTTCGATCTTTCTCCTTTATTCATCATCGCTTTGTGTTCCCACCGAGGACGACGTGGTTTGCCTCCAAGGTGTGAAAAGCTCATTTTCCGACCCAAATGGAAAACTCAACTCCTGGAGCTTCACCAACACTTCTGTGTCCTCAATCTGCCAGCTTGTCGGAGTTTCTTGCTGGAACGAAAAGGAGACCCGCATCATTAGCCTCCAGCTCCGTGACATGCAGCTCGCCGGAAAACTCCCTGAGTCGCTCAAGTATTGCCGGAGCCTCCAGACCCTCGTACTCTCAGGTAATGCTCTCTCGGGTTCGATCCCTCCTTATATCTGTAGCTGGTTGCCTTATTTGGTGACCCTAGATCTCTCCGGTAACCAAATCTCGGGTTCAATCCCACCCGAGATTGTGAACTGCAAGTTCCTGAATACTCTTATTCTGAACGATAACAAATTATCGGGTTCGATCCCTTACGAACTGGGTCGGCTTGACCGATTGAAGAGGCTCTCTGTTTCCAATAACGATCTCTCGGGTTCTATTCCACCGGATTTGTCCAAATTTGACGCGGCTGATTTTGATGGGAATGGTGGATTATGCGGGAAGCCTACTGGATCAAAGTGTGGTGGATTGAGTCGCAAAAGTCTCGGGATTATTATTGCAGCTGGTGCGATTGGAGCCTTGGGATCTTTAGTTGTGGGTTTCGCTCTCTGGTGGTGGTTTTTCCTGAGAGTCAGTGAGCAAAAGAAAGAGTACAGTGGTTCTGGTGGTGGAAAGCAAGTGGGTGACTGGATTGATTTGCTAAAGTCATACAAGCTTGCTCAAGTTTCTTTGTTCCAGGAACCCATATTGAAGGTCAAATTAGCTGATTTGCTAATAGCCACTAATAGTTTTCATCCAGAAAATATTGTCATTTCTAGTAGAACAGGAGTGTCTTATAAGGCAGTTTTGCGTGATGGGTCAGCTCTTGCTGTGAAGAGGCTTAATTCTTGTAAACTTGTTGAGGAGCAATTTAGATCGGACATGAACAGGTTGGGGCAGCTCAGACACCCCAATTTGGTACCTCTATTGGGTTTCCGTGTGGTGGAAGAAGAGAAACTTTTGGTGTACAAGCACATGTTCAATGGGACCTTGTATTCTCAGTTGCATAAAAATGGTCAAGCTAATAATAGTCAATATAGTTTTCTGGATTGGCCAACCAGGCTGAGAATTGGAACAGGTGCTGCTAGAGGACTTGCTTGGCTTCACCATGCTTGTCAACCTCCCTATATGCACCAGAACATCAGCTCAAATATAGTCCTTCTTGACTATGATTTCGAAGCTCGAATAACAGATTTCGGATTGGCGACGCTCGTGGTTAATCGTGATCCCAATGATAGCTCCTTTGTGAATGGTGATCTGGGTGAATTTGGTTATGTTGCTCCTGAGTACTCAAGCACCATGGTTGCTTCCCTGAAAGGCGATGTTTATGGTTTTGGAGTTGTTCTCTTGGAATTGGTCACCGGGATGAAGCCGGTTGAAGTGAACGCTGGAGGGGAAGGATTCAAAGGGAATTTAGTGGATTGGATGAATTGGTTAACTGTGACAGGAAGAACTAAAGAAGCCATAGATAAAGCTTTGTTAAATGAGCACCCTGAACATGGTGATGAATTTATGCAATTCATGAAGGTTGCCTTATCTTGTGTTGTTTCTAGACCTAAAGATAGACCTTCCATGTACCAAGTTTTCTCCTCACTGAAGAGCATGGCTGAGAAACATGGTTTTGCAGATCAGTATGATGACTTCCCAGTTATCTCTGGTAAAGAAGATTCTGACTACAATAAGAATTAG 1836 0.4461 MNFIFLTVSIFLLYSSSLCVPTEDDVVCLQGVKSSFSDPNGKLNSWSFTNTSVSSICQLVGVSCWNEKETRIISLQLRDMQLAGKLPESLKYCRSLQTLVLSGNALSGSIPPYICSWLPYLVTLDLSGNQISGSIPPEIVNCKFLNTLILNDNKLSGSIPYELGRLDRLKRLSVSNNDLSGSIPPDLSKFDAADFDGNGGLCGKPTGSKCGGLSRKSLGIIIAAGAIGALGSLVVGFALWWWFFLRVSEQKKEYSGSGGGKQVGDWIDLLKSYKLAQVSLFQEPILKVKLADLLIATNSFHPENIVISSRTGVSYKAVLRDGSALAVKRLNSCKLVEEQFRSDMNRLGQLRHPNLVPLLGFRVVEEEKLLVYKHMFNGTLYSQLHKNGQANNSQYSFLDWPTRLRIGTGAARGLAWLHHACQPPYMHQNISSNIVLLDYDFEARITDFGLATLVVNRDPNDSSFVNGDLGEFGYVAPEYSSTMVASLKGDVYGFGVVLLELVTGMKPVEVNAGGEGFKGNLVDWMNWLTVTGRTKEAIDKALLNEHPEHGDEFMQFMKVALSCVVSRPKDRPSMYQVFSSLKSMAEKHGFADQYDDFPVISGKEDSDYNKN 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01281 611 Gene3D Ribonuclease Inhibitor 23 212 IPR032675 -
Accr10g01281 611 Gene3D Phosphorylase Kinase; domain 1 262 374 - -
Accr10g01281 611 Pfam Leucine rich repeat N-terminal domain 23 65 IPR013210 -
Accr10g01281 611 Pfam Leucine Rich Repeat 168 190 IPR001611 GO:0005515
Accr10g01281 611 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 22 211 - -
Accr10g01281 611 SUPERFAMILY L domain-like 19 198 - -
Accr10g01281 611 Pfam Protein tyrosine and serine/threonine kinase 323 580 IPR001245 GO:0004672|GO:0006468
Accr10g01281 611 ProSiteProfiles Protein kinase domain profile. 300 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g01281 611 SUPERFAMILY Protein kinase-like (PK-like) 278 581 IPR011009 -
Accr10g01281 611 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 261 374 - -
Accr10g01281 611 Gene3D Transferase(Phosphotransferase) domain 1 375 602 - -
Accr10g01281 611 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 56 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01281 Accr-Chr10 35462347 35464182 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01281 3 606 Receptor kinase-like Gene Family AT1G27190 64.901 0.0 783
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Accr10g01281 PK_Tyr_Ser-Thr 6.8e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01281 - - qsa:O6P43_025373 912.909