Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Accr10g01269 | ATGGCAAGCTCCAATCACCTGCAGCTTCTGGATGGCTGGTTCAGTCCATTCGCTTTGAGGGTTAAGATTGCCTTCAACATCAAATCTCTGAAATATGAAAACATTGAAGAGACCTTTCACCCAAAAAGCCAGCTTCTTTTGCAGTCAAATCCTGTGCACAAGAAAATCCCAGTCCTCCTTCACGGAGGCAAACCCATATGTGAATCTAGAATCATCCTCGAATACATAGACGAGGTTTGGAACTCTGCTCCCACCATCCTACCAGCCGATGCTTACGAGCGAGCCATGGCTCGTTTCTGGGCTGCCTACATCGATGACAAATTTTTTGTGGCCATGAAAAAGGCTGTTGGTGAAGAAGATGAAGAAGCGAGGAAGCCATACGTAGAGGAACTAGAAGAAGCGCTAGTAACAATGGAAGGTGAGTTGCAGAAATGTTGCAGAGAAGGGAAGGGATTTTTTGGAGAAGAGATTGGATTGGTTGATATTACTTTTGGAAGCTTGCTGGGTTGGTTGGGTGTGATAGAGAGTATGAATGGAAGAAAGATGATTGTTGAAGAAAAGCATCCTTGTTTGGTGAAATGGGCAGAGAGATTCTCCTCTAACCCTAATGTGAAGGGTTTGATACCTGAGGCTGACAAACTCATTCAGTTCTCAAAGGCTATTAAGATGAAAAGGAAACCTGCTGCTTCTGCAAAGTAA | 699 | 0.4406 | MASSNHLQLLDGWFSPFALRVKIAFNIKSLKYENIEETFHPKSQLLLQSNPVHKKIPVLLHGGKPICESRIILEYIDEVWNSAPTILPADAYERAMARFWAAYIDDKFFVAMKKAVGEEDEEARKPYVEELEEALVTMEGELQKCCREGKGFFGEEIGLVDITFGSLLGWLGVIESMNGRKMIVEEKHPCLVKWAERFSSNPNVKGLIPEADKLIQFSKAIKMKRKPAASAK | 232 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Accr10g01269 | 232 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 5 | 84 | IPR004045 | - | |
| Accr10g01269 | 232 | Gene3D | Glutaredoxin | 3 | 86 | - | - | |
| Accr10g01269 | 232 | SUPERFAMILY | Thioredoxin-like | 9 | 109 | IPR036249 | - | |
| Accr10g01269 | 232 | PANTHER | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | 12 | 215 | IPR045073 | - | |
| Accr10g01269 | 232 | FunFam | Glutathione S-transferase U9 | 87 | 228 | - | - | |
| Accr10g01269 | 232 | Coils | Coil | 128 | 148 | - | - | |
| Accr10g01269 | 232 | Gene3D | - | 87 | 229 | - | - | |
| Accr10g01269 | 232 | FunFam | Glutathione S-transferase GSTU6 | 2 | 87 | - | - | |
| Accr10g01269 | 232 | Pfam | Glutathione S-transferase, N-terminal domain | 7 | 78 | IPR004045 | - | |
| Accr10g01269 | 232 | CDD | GST_C_Tau | 91 | 221 | IPR045074 | GO:0004364|GO:0006749 | |
| Accr10g01269 | 232 | Pfam | Glutathione S-transferase, C-terminal domain | 99 | 202 | IPR004046 | - | |
| Accr10g01269 | 232 | SFLD | Glutathione Transferase (cytosolic) | 4 | 226 | IPR040079 | - | |
| Accr10g01269 | 232 | SUPERFAMILY | GST C-terminal domain-like | 78 | 221 | IPR036282 | - | |
| Accr10g01269 | 232 | CDD | GST_N_Tau | 7 | 80 | - | - | |
| Accr10g01269 | 232 | SFLD | Main.3: Omega- and Tau-like | 4 | 226 | IPR045073 | - | |
| Accr10g01269 | 232 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 90 | 221 | IPR010987 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Accr10g01269 | Accr-Chr10 | 35363530 | 35364326 | Dispersed/Proximal |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Accr10g01269 | 1 | 221 | Glutathione S-transferase Gene Family | AT1G10370 | 51.570 | 6.25e-74 | 222 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Accr10g01269 | K00799 | - | gmx:547576 | 275.018 |