Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01253 ATGGCAAGCTCTAATCACCTGAAGCTTCTGGGTGGCTGGTTCAGTCCGTTTGTAATGAGGGTTAAGATTGCTCTCAATATCAAATCTCTGGTATACGAGAACATTGAAGAGACCTTAAACCCAAAAAGTCAGCTCCTTTTGCAGTTAAATCCTATGCACAAGAAAATCCCAGTCCTCCTTCACGGAGACAAAACCATCTGTGAATCCAGAATCATCGTCGAATACGTAGACGAGGTTTGGAACTCTGGTCCCTCCTTCCTACATTCAGATGCTTACGATCGAGCCATTGCTCGTTTCTGGGCTGCCTACATAGATGATAAGCTTTTTGTGGCAATGATACACGCTCTTAAGGAAGAAGATGAAGAAGCGAGGAAGGCATACTTGGAGGAAATAGAAGATTCGCTTGTGACAATGGAAGATGAGTTGCAGAAATGTTGCAGAGAAGGGAAGGGATATTTTGGAGGAGAAGAGATCGGGTTGGTTGATATTACTTTTGGAAGCTTACTGTGTTGGGTGAGTGTGATAGAGACTGTGAATGGAAGAAAGATGATTGTTGAAGAAAAGCATCCTTGTTTGGTGAAATGGGCAGAGAGATTTGAGTTTGATCCTAATGTGAAGGGGTTGATACCTGAGACTGAGAAACTAATTGAGTTTGCTCTTCAGATGAAGTGGAAAGGTGCTGCTTCTGCAAAGTAA 696 0.4282 MASSNHLKLLGGWFSPFVMRVKIALNIKSLVYENIEETLNPKSQLLLQLNPMHKKIPVLLHGDKTICESRIIVEYVDEVWNSGPSFLHSDAYDRAIARFWAAYIDDKLFVAMIHALKEEDEEARKAYLEEIEDSLVTMEDELQKCCREGKGYFGGEEIGLVDITFGSLLCWVSVIETVNGRKMIVEEKHPCLVKWAERFEFDPNVKGLIPETEKLIEFALQMKWKGAASAK 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01253 231 Gene3D - 86 230 - -
Accr10g01253 231 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 10 217 IPR045073 -
Accr10g01253 231 CDD GST_C_Tau 91 222 IPR045074 GO:0004364|GO:0006749
Accr10g01253 231 SFLD Main.3: Omega- and Tau-like 4 225 IPR045073 -
Accr10g01253 231 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 226 IPR010987 -
Accr10g01253 231 SFLD Main (cytGST) 4 225 - -
Accr10g01253 231 Coils Coil 128 148 - -
Accr10g01253 231 Pfam Glutathione S-transferase, N-terminal domain 7 78 IPR004045 -
Accr10g01253 231 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 84 IPR004045 -
Accr10g01253 231 SUPERFAMILY GST C-terminal domain-like 78 222 IPR036282 -
Accr10g01253 231 SUPERFAMILY Thioredoxin-like 7 109 IPR036249 -
Accr10g01253 231 FunFam Glutathione S-transferase GSTU6 2 87 - -
Accr10g01253 231 CDD GST_N_Tau 7 80 - -
Accr10g01253 231 FunFam Glutathione S-transferase U9 87 229 - -
Accr10g01253 231 Pfam Glutathione S-transferase, C-terminal domain 100 200 IPR004046 -
Accr10g01253 231 Gene3D Glutaredoxin 1 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01253 Accr-Chr10 35214919 35215985 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01253 1 222 Glutathione S-transferase Gene Family AT1G10370 53.363 2.64e-77 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01253 K00799 - gmx:547576 284.263