Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01250 ATGTCTCCTTCCTCAACATTCCCCTTTCCCTTCTTCACTCTTTTCTTCCTCCTCCTCCGCTTTAGTTCGTACCCTGCCTCTGCTCACACTCACACTTGCTCTTCACACTCACCAAGCTCCTCGTCTTCTTCATCTTCTTCTTCTTTTTGCCCTCCTTTCTCTTCAAACCCTCCTTTCCCATTCTCTTTCTCTCCGGGTTGTGGCCACCCTTCCTTCCAAATCCAATGTTCAACTCATCAATCCATCATCTCCATTAACAACTTAACCTTCTCTGTTCTTACTTATAACCCCAATTCTTCTTCTCTCACCCTTTTGCCTCATCTTGATAATGCAACAACCTTAGCCCCCCACAGAAATTGCTCCACTCCATGGTTGCTTTCTATTCTCAATCGTTCTCTTGATCTCTCTGGCTCTCCTTTCAGAATCTCCGATGCTCTCTGTTCTCGCCTCTCTGGTATCCAACCTTGTTCGCCTCCTTCTCTGCCAAACTGTAGCCACTGTCCATGGGAATGTAGCCTCATCAAGAACCCAGCTCACCTCCTTGACTGTGGATCTGCCCATCGCTCCGTTTCAGACTTAGAGAATCGCTGCGAAAGTGATGTTTTGGGGTATATCGACGACATACTTGCTCGAGGGATCGAAGTTGAGTGGGATGAAGCTCAAGATCCTTACTTTTCAAGCTGCAGAAACTGTAGCTCAGACACGGGAGTTTGTGGATTCAATTCATCCGACCCACATAACCAATTTATATGTTTTCGCTCCAAATCTGAATCTAGTTTCACTCCGGGTTGGGTTCAAAGTGTGAATCCCAAGCGTAACACAGTTTTGTCTCTTGTCGTCCCTTTAATGTTGTTGCTTCTTTTTGTTTCTGTTGTTACTGCAATTTTCCGGTCCAGAAGATTCAAGTCATCGAGGACAGAGGAAGACCCAACAATCGTTTTCCTTCACAACCAGCGACCCGCCAGTCTTCTTCCTCCAGTATTCACCTACGAGGAATTGGAGGCGGCCACCAATCGGTTCGACCCGAAACGCAAAATTGGTGATGGCGGGTTCGGGTCGGTGTACCTGGGTCAGCTCCATGATAGCCGGATTGTCGCCGTGAAGTACCTCCATAATCACCACACGGAGGCCGCCGCGGGACGAGCTTTTTGCGCAAAGTCTTTCTGCAACGAAATTTTGATTCTTTCTTCCATCGACCACCCGAATCTAGTCAAGCTTCATGGGTATTGCAGCGACCCGAGAGGATTGCTTCTGGTCTATTACTATGTCCCCAATGGAACTCTCGCTGAACATCTTCACGGTCCCAAGAGTTCATTCCGAAAGGGGTCTCTGACGTGGCAAGTGAGGCTCGATATTGCTCTGCAAACAGCATTAGCCATGGAGTACCTTCACTGCTCTGTTGTGCCACCAATAGTTCACAGAGACATTACTTCGTCTAACATCTTCGTGGAGAGAGATATGAGGATTAAAGTCGGAGACTTTGGGCTGTCTCGGCTATTGGTTTTGCAGGATACGTCGTCGTCTTCAACTGGGTATGTCTGGACGGGTCCACAGGGTACACCCGGGTATTTGGATCCGGATTACCATCGGTCGTTCCGGTTAACGGAAAAGAGTGATGTGTATAGCTTTGGGGTGGTGTTACTAGAGCTGATTTCCGGGTTGAAGGCGGTGGATCAGAGCAGGGATAAGCGGGAAATCGCGTTGGCCGACTTGGTGGTCTCTAGAATCCATATGGGTCAGTTGAATCAGGTGGTCGACCCGGTTTTGGCGAAGGAGGAAGTGATGGACGCCGTCGCCGCGGTGGCGGAGCTGGCGTTCCGTTGTGTGGCGGCGGACAAGGACGACCGGCCGGACTCGAAAGAAGTGGTGGGGGAGCTGAAACGGATACGGGCCCAGACGCTGGCGCGTCTCCGATCGTCGTCGAATTCCCACGCCGGTGCTGACATGGCGAAGAACAATGAAGTGAGGGAATGTGGATTGTGA 1983 0.5008 MSPSSTFPFPFFTLFFLLLRFSSYPASAHTHTCSSHSPSSSSSSSSSSFCPPFSSNPPFPFSFSPGCGHPSFQIQCSTHQSIISINNLTFSVLTYNPNSSSLTLLPHLDNATTLAPHRNCSTPWLLSILNRSLDLSGSPFRISDALCSRLSGIQPCSPPSLPNCSHCPWECSLIKNPAHLLDCGSAHRSVSDLENRCESDVLGYIDDILARGIEVEWDEAQDPYFSSCRNCSSDTGVCGFNSSDPHNQFICFRSKSESSFTPGWVQSVNPKRNTVLSLVVPLMLLLLFVSVVTAIFRSRRFKSSRTEEDPTIVFLHNQRPASLLPPVFTYEELEAATNRFDPKRKIGDGGFGSVYLGQLHDSRIVAVKYLHNHHTEAAAGRAFCAKSFCNEILILSSIDHPNLVKLHGYCSDPRGLLLVYYYVPNGTLAEHLHGPKSSFRKGSLTWQVRLDIALQTALAMEYLHCSVVPPIVHRDITSSNIFVERDMRIKVGDFGLSRLLVLQDTSSSSTGYVWTGPQGTPGYLDPDYHRSFRLTEKSDVYSFGVVLLELISGLKAVDQSRDKREIALADLVVSRIHMGQLNQVVDPVLAKEEVMDAVAAVAELAFRCVAADKDDRPDSKEVVGELKRIRAQTLARLRSSSNSHAGADMAKNNEVRECGL 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01250 660 Pfam Protein tyrosine and serine/threonine kinase 343 625 IPR001245 GO:0004672|GO:0006468
Accr10g01250 660 MobiDBLite consensus disorder prediction 639 660 - -
Accr10g01250 660 FunFam Putative serine/threonine-protein kinase At1g18390 family 316 422 - -
Accr10g01250 660 Gene3D Phosphorylase Kinase; domain 1 316 422 - -
Accr10g01250 660 Gene3D Transferase(Phosphotransferase) domain 1 423 653 - -
Accr10g01250 660 ProSitePatterns Protein kinases ATP-binding region signature. 346 368 IPR017441 GO:0005524
Accr10g01250 660 SUPERFAMILY Protein kinase-like (PK-like) 324 633 IPR011009 -
Accr10g01250 660 ProSiteProfiles Protein kinase domain profile. 340 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g01250 660 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 11 635 IPR044652 GO:0004672
Accr10g01250 660 ProSitePatterns Tyrosine protein kinases specific active-site signature. 471 483 IPR008266 GO:0004672|GO:0006468
Accr10g01250 660 CDD STKc_IRAK 346 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01250 Accr-Chr10 35163861 35165843 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01250 50 652 Receptor kinase-like Gene Family AT1G69910 63.301 0.0 723
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Accr10g01250 PK_Tyr_Ser-Thr 1.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01250 - - qsa:O6P43_033079 854.744