Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01207 ATGGAAGGAACTTCTTTGAAATGTGAACCGAGCCAAACAAGCCACTCTTACATGGTGGATGGTGGTGAGAGTGATGCTGGTAAGTGTGGCAAAAGGAGGCGTAGAGATTCTTCTTTGGCCGTCTTAGAAGTCAATGAACAGCCACAAGAACAGCAGCCACAGGCTGACCGATCAACCACCACCACCGTGAAGAGAAGCTCAAGGTTTCGGGGAGTTAGCAGACATAGGTGGACAGGAAGGTATGAGGCTCACCTATGGGATAAAGGAACATGGAATCCAACTCAGAAAAAGAAAGGGAAGCAAGTTTATCTTGGGGCTTATACTGATGAAGAAGCAGCTGCTAGAGCTTATGATTTAGCTGCACTAAAGTACTGGGGAACTTCAACTTTCATAAATTTCTCTGTGTCTGAGTATGAGAAAGAGATTGAGATCATGAAAAATGTAACCAAAGAAGAATACCTTGCTTCATTAAGAAGGAGAAGTAGTGGATTTTCTAGAGGTGTGTCAAGGTACAGAGGAGTAGCAAGGCACCATCACAATGGCAGATGGGAAGCAAGGATTGGGAGAGTATTTGGCAACAAGTACCTATACCTTGGGACTTACAGTACACAAGAAGAGGCTGCTCGCGCATATGACATCGCAGCGATTGAGTACAGAGGCATAAATGCAGTGACTAATTTTGACTTGAGCACATACATCAGATGGCTTAGACCTGGATCATCTTCTTCCTCTTCTTTACTAGTGGAAAAGCCAAGCACAGATCCTCAGATCATGACAACCTCAAACCTTGTCCCCACAGATGGAACAAATGAGGCAGCCAATTTCATCCCCCATCCATTCCCAGCTGGTGATTCTGACATTACAGAGAAGCAAGCAAGTTCACAATACATGAGCTCTCTAAGTGCCTTCAATAACAAGTCATCTTCCCCGACAGCACTGGGGATTCTCCTGAAATCATCAGTTTTTAGAGAGCTAATGCAGAAGAATCTGAATTCTGCTAATGAAGAAGCAGAAGAAAGTGAATTGAAGATCCCACAACAAGAAGGCAGTCATGGGGTTGGAGTGGCTTTTGATCATGAAGTTGCAAGTAACTCTTTCTTGTGCACTCCCAGTAGTTGCAGATTTTGCATGGAGCCACTAGGAGGAAGCACATGCCCATTGTATCATAGAACCAGGCAATCCCTATGGGGTGGTGCTTTAAACTGA 1206 0.4453 MEGTSLKCEPSQTSHSYMVDGGESDAGKCGKRRRRDSSLAVLEVNEQPQEQQPQADRSTTTTVKRSSRFRGVSRHRWTGRYEAHLWDKGTWNPTQKKKGKQVYLGAYTDEEAAARAYDLAALKYWGTSTFINFSVSEYEKEIEIMKNVTKEEYLASLRRRSSGFSRGVSRYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGINAVTNFDLSTYIRWLRPGSSSSSSLLVEKPSTDPQIMTTSNLVPTDGTNEAANFIPHPFPAGDSDITEKQASSQYMSSLSAFNNKSSSPTALGILLKSSVFRELMQKNLNSANEEAEESELKIPQQEGSHGVGVAFDHEVASNSFLCTPSSCRFCMEPLGGSTCPLYHRTRQSLWGGALN 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01207 401 MobiDBLite consensus disorder prediction 1 69 - -
Accr10g01207 401 SUPERFAMILY DNA-binding domain 67 136 IPR016177 GO:0003677
Accr10g01207 401 FunFam AP2-like ethylene-responsive transcription factor 169 230 - -
Accr10g01207 401 Coils Coil 323 343 - -
Accr10g01207 401 CDD AP2 169 230 IPR001471 GO:0003700|GO:0006355
Accr10g01207 401 ProSiteProfiles AP2/ERF domain profile. 170 228 IPR001471 GO:0003700|GO:0006355
Accr10g01207 401 Pfam AP2 domain 67 126 IPR001471 GO:0003700|GO:0006355
Accr10g01207 401 Pfam AP2 domain 169 220 IPR001471 GO:0003700|GO:0006355
Accr10g01207 401 MobiDBLite consensus disorder prediction 1 19 - -
Accr10g01207 401 FunFam AP2-like ethylene-responsive transcription factor 67 136 - -
Accr10g01207 401 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 46 301 - -
Accr10g01207 401 MobiDBLite consensus disorder prediction 25 40 - -
Accr10g01207 401 Gene3D AP2/ERF domain 67 136 IPR036955 GO:0003700|GO:0006355
Accr10g01207 401 Gene3D AP2/ERF domain 169 230 IPR036955 GO:0003700|GO:0006355
Accr10g01207 401 PRINTS Ethylene responsive element binding protein signature 210 230 IPR001471 GO:0003700|GO:0006355
Accr10g01207 401 PRINTS Ethylene responsive element binding protein signature 69 80 IPR001471 GO:0003700|GO:0006355
Accr10g01207 401 ProSiteProfiles AP2/ERF domain profile. 68 134 IPR001471 GO:0003700|GO:0006355
Accr10g01207 401 SMART rav1_2 170 234 IPR001471 GO:0003700|GO:0006355
Accr10g01207 401 SMART rav1_2 68 140 IPR001471 GO:0003700|GO:0006355
Accr10g01207 401 SUPERFAMILY DNA-binding domain 169 230 IPR016177 GO:0003677
Accr10g01207 401 MobiDBLite consensus disorder prediction 42 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01207 Accr-Chr10 34467682 34470471 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01207 50 232 AP2-EREBP Transcription Factor Family AT5G57390 65.027 7.37e-83 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Accr10g01207 AP2 4e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01207 - - gmx:100798483 488.419