Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01206 ATGGAAGGAACTTCTTTGAAATGTGAACCGAGCCAAACAAGCCACTCTTACATGGTGGATGGTGGTGAGAGTGATGCTGGTAAGTGTGGCAAAAGGAGGCGTAGAGATTCTTCTTTGGCCGTCTTAGAAGTCAATGAACAGCCACAAGAACAGCAGCCACAGGCTGACCGATCAACCACCACCACCGTGAAGAGAAGCTCAAGGTTTCGGGGAGTTAGCAGACATAGGTGGACAGGAAGGTATGAGGCTCACCTATGGGATAAAGGAACATGGAATCCAACTCAGAAAAAGAAAGGGAAGCAAGGGGCTTATACTGATGAAGAAGCAGCTGCTAGAGCTTATGATTTAGCTGCACTAAAGTACTGGGGAACTTCAACTTTCATAAATTTCTCTGTGTCTGAGTATGAGAAAGAGATTGAGATCATGAAAAATGTAACCAAAGAAGAATACCTTGCTTCATTAAGAAGGAGAAGTAGTGGATTTTCTAGAGGTGTGTCAAGGTACAGAGGAGTAGCAAGGCACCATCACAATGGCAGATGGGAAGCAAGGATTGGGAGAGTATTTGGCAACAAGTACCTATACCTTGGGACTTACAGTACACAAGAAGAGGCTGCTCGCGCATATGACATCGCAGCGATTGAGTACAGAGGCATAAATGCAGTGACTAATTTTGACTTGAGCACATACATCAGATGGCTTAGACCTGGATCATCTTCTTCCTCTTCTTTACTAGTGGAAAAGCCAAGCACAGATCCTCAGATCATGACAACCTCAAACCTTGTCCCCACAGATGGAACAAATGAGGCAGCCAATTTCATCCCCCATCCATTCCCAGCTGGTGATTCTGACATTACAGAGAAGCAAGCAAGTTCACAATACATGAGCTCTCTAAGTGCCTTCAATAACAAGTCATCTTCCCCGACAGCACTGGGGATTCTCCTGAAATCATCAGTTTTTAGAGAGCTAATGCAGAAGAATCTGAATTCTGCTAATGAAGAAGCAGAAGAAAGTGAATTGAAGATCCCACAACAAGAAGGCAGTCATGGGGTTGGAGTGGCTTTTGATCATGAAGTTGCAAGTAACTCTTTCTTGTGCACTCCCAGTAGTTGCAGATTTTGCATGGAGCCACTAGGAGGAAGCACATGCCCATTGTATCATAGAACCAGGCAATCCCTATGGGGTGGTGCTTTAAACTGA 1197 0.447 MEGTSLKCEPSQTSHSYMVDGGESDAGKCGKRRRRDSSLAVLEVNEQPQEQQPQADRSTTTTVKRSSRFRGVSRHRWTGRYEAHLWDKGTWNPTQKKKGKQGAYTDEEAAARAYDLAALKYWGTSTFINFSVSEYEKEIEIMKNVTKEEYLASLRRRSSGFSRGVSRYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGINAVTNFDLSTYIRWLRPGSSSSSSLLVEKPSTDPQIMTTSNLVPTDGTNEAANFIPHPFPAGDSDITEKQASSQYMSSLSAFNNKSSSPTALGILLKSSVFRELMQKNLNSANEEAEESELKIPQQEGSHGVGVAFDHEVASNSFLCTPSSCRFCMEPLGGSTCPLYHRTRQSLWGGALN 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01206 398 MobiDBLite consensus disorder prediction 1 69 - -
Accr10g01206 398 ProSiteProfiles AP2/ERF domain profile. 167 225 IPR001471 GO:0003700|GO:0006355
Accr10g01206 398 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 46 298 - -
Accr10g01206 398 PRINTS Ethylene responsive element binding protein signature 69 80 IPR001471 GO:0003700|GO:0006355
Accr10g01206 398 PRINTS Ethylene responsive element binding protein signature 207 227 IPR001471 GO:0003700|GO:0006355
Accr10g01206 398 MobiDBLite consensus disorder prediction 1 19 - -
Accr10g01206 398 SUPERFAMILY DNA-binding domain 67 133 IPR016177 GO:0003677
Accr10g01206 398 ProSiteProfiles AP2/ERF domain profile. 68 131 IPR001471 GO:0003700|GO:0006355
Accr10g01206 398 SMART rav1_2 167 231 IPR001471 GO:0003700|GO:0006355
Accr10g01206 398 SMART rav1_2 68 137 IPR001471 GO:0003700|GO:0006355
Accr10g01206 398 MobiDBLite consensus disorder prediction 25 40 - -
Accr10g01206 398 Coils Coil 320 340 - -
Accr10g01206 398 CDD AP2 166 227 IPR001471 GO:0003700|GO:0006355
Accr10g01206 398 Gene3D AP2/ERF domain 67 133 IPR036955 GO:0003700|GO:0006355
Accr10g01206 398 Gene3D AP2/ERF domain 166 227 IPR036955 GO:0003700|GO:0006355
Accr10g01206 398 Pfam AP2 domain 67 123 IPR001471 GO:0003700|GO:0006355
Accr10g01206 398 Pfam AP2 domain 166 217 IPR001471 GO:0003700|GO:0006355
Accr10g01206 398 MobiDBLite consensus disorder prediction 42 67 - -
Accr10g01206 398 FunFam AP2-like ethylene-responsive transcription factor 166 227 - -
Accr10g01206 398 SUPERFAMILY DNA-binding domain 166 227 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01206 Accr-Chr10 34467682 34470471 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01206 50 229 AP2-EREBP Transcription Factor Family AT5G57390 63.388 2.44e-78 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Accr10g01206 AP2 1.9e-07 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01206 - - gmx:100798483 477.248