Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01199 ATGAAAGTTTTCTGTGTTTCGTTCTTCCCTTACCTTCTTTCTGCAATTTTTCTTGTTCTTCTGCTTGCTCACAATTCAACTGCACAGTTAACACCGAGTGAGAGTAGAATTCTGTTCCAAGTTCAGAAGATTCTCGAATATCCTCAGGTTCTTCAAGGATGGAACAACTGGACTAATTTCTGTTATCTACCTTATTCACCTTCTCTCCAGATTGTCTGCTCTAACAGGCATGTAACAGAATTAACAATCATTGGAAACAACACCTCTCTTTCTGAAAGATTTTCCATTGATTCTTTCTTCACTGTCTTGACAAAGCTTTCAAATTTGAAGGTGCTTTCTTTAGTGTCCTTGGGTTTGTGGGGTCCTTTACCAGTCAAGCTCAACAGGTTCAGGTCTCTTCAAGTTCTGAACTTGACCTCAAATTCCATTCATGGTGAGATCCCACCATCAGTCTCTTCCATTCAAAGTCTCAAAAGTCTGGTTTTGGCTGGGAATTTGTTAAATGGGACTGTTCCAGATCTTGAAGGATTAACTTCTCTTGAAGAACTCAATCTGGGAAACAACAAACTAGGTCCTGAGTTCCCTTCATTACCCAATAATCTTGTAACTTTAGTATTGAGAAACAATTCTCTGAGGTCTAAATTTCCTTCCAAGTTCAATCAGTTTAACAAGCTTCAGAAACTTGATATTTCTTCCAATGAAGTTTCTGGAAACATCCCATCTTCTCTGTTCTCTCTGCCTTCAATTCAGTATGTAAACTTTGCAGACAACAAACTAAATGGTTCCCTTTCAATGAACATTCGATGTGGTTCTTCTCTGATCTTTGTGGATATCTCAAACAATCTTTTGGTGGGAAAATTGCCTTCCTGTATTGCGTCAACCTCAAATTATTCAAATCACACGGTTTTGTATTCTGGGAATTGTTTATCCATAAGAGGCTCGAAAGATCAACACCAAACTTCATATTGCAAGGACGAGGAAGCTTTAGCTGCTGAGCCTCTTGAAGGAAACCAGAAAAAGTCAGATATGAGATTAAGCTTGGAACTTGGTATAATTGGAGGGTCTGTAGGAATTTCAATGCTTTTAGCTCTGATCATTCTTCTCATCTTGAGGAAGACCAAAACAGAGAGAGCTGATAAAAATTACCTAGACAGATCTGTTGCTGTTAAATCCCCAGTTCATGCATCCCCAAGGCCAAATACTGATACAAGACGAGTTCCTCAGACTACGAGGTTGCCAGCGATTGGACTTCAACCATACAGAATCTTCACTTCAGAGGAAATAGAGGAGGCAACAAACAATTTTGACCCATCAAATCTGAGAGAAGGAACAGAGGGACAGCAATACAAAGGATGGATCAGAGATGGGTCTGTGGTCCTAATCAACTGTGTAAAGCTAATGCACAAGAATGTGACCCAAAACCACATTGAGTTGCTCTCTAATTTGAGGCACAGGCATTTGGTAAGTGTTGTTGGACACTGCTTAGTAGCTTCTCAGTACCACCGTCAGACAACAAGCACAATCTTTATTGTTTATGAACAATTCTCAAATGGGTCATTGAGGGATCATTTAACAGATTGGAGGAAGAAGGAAGTGCTGAAATGGCCACAAAGAATGGCGATTACCATGGGAATTGCAAGGGGAATCCAGTTCTTACATACAGGGATTGTTCCTGGTATATTTGGCAATGACATTAAGATTGAGAAAATGTTTTTGGATGATAGTCTCAATGCAAAAGTTAGTGGATATAACATTCCATTATTATCCAATCATATTGACAGCACTGACAACACCGCAGACAAGGAAGATATATATCAGTTTGGTGTTATTCTATTGGAAGTAATTACTGGCAAATCAATTTCTTCTGTCAATGAAGTAGAGGAGCTGAAAGATGAGCTGGAGAGAAGTTTATCAGAAGCAGCGTCAGTACTTAGAGAAGTAACTGATCCCTCAATCAGTGGAACTTATGCTTACGAATCCATGAGAACCACAATTCAGATTACCATAAGTTGCCTCAGTAAAGTTCCTAGTACACGCCCTTCAATAGAAGATGTTATCTGGAATTTGCAGTACTCATTTCAGGTCCAAGAGAACTGGACCAGCAGTGGAAATCTCGGACTTGGTACCAGATTTTAG 2136 0.3951 MKVFCVSFFPYLLSAIFLVLLLAHNSTAQLTPSESRILFQVQKILEYPQVLQGWNNWTNFCYLPYSPSLQIVCSNRHVTELTIIGNNTSLSERFSIDSFFTVLTKLSNLKVLSLVSLGLWGPLPVKLNRFRSLQVLNLTSNSIHGEIPPSVSSIQSLKSLVLAGNLLNGTVPDLEGLTSLEELNLGNNKLGPEFPSLPNNLVTLVLRNNSLRSKFPSKFNQFNKLQKLDISSNEVSGNIPSSLFSLPSIQYVNFADNKLNGSLSMNIRCGSSLIFVDISNNLLVGKLPSCIASTSNYSNHTVLYSGNCLSIRGSKDQHQTSYCKDEEALAAEPLEGNQKKSDMRLSLELGIIGGSVGISMLLALIILLILRKTKTERADKNYLDRSVAVKSPVHASPRPNTDTRRVPQTTRLPAIGLQPYRIFTSEEIEEATNNFDPSNLREGTEGQQYKGWIRDGSVVLINCVKLMHKNVTQNHIELLSNLRHRHLVSVVGHCLVASQYHRQTTSTIFIVYEQFSNGSLRDHLTDWRKKEVLKWPQRMAITMGIARGIQFLHTGIVPGIFGNDIKIEKMFLDDSLNAKVSGYNIPLLSNHIDSTDNTADKEDIYQFGVILLEVITGKSISSVNEVEELKDELERSLSEAASVLREVTDPSISGTYAYESMRTTIQITISCLSKVPSTRPSIEDVIWNLQYSFQVQENWTSSGNLGLGTRF 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01199 711 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g02780 31 199 - -
Accr10g01199 711 Pfam Protein kinase domain 442 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g01199 711 Gene3D Transferase(Phosphotransferase) domain 1 597 703 - -
Accr10g01199 711 Gene3D Phosphorylase Kinase; domain 1 407 513 - -
Accr10g01199 711 Gene3D Ribonuclease Inhibitor 31 338 IPR032675 -
Accr10g01199 711 ProSiteProfiles Protein kinase domain profile. 434 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g01199 711 SUPERFAMILY Protein kinase-like (PK-like) 414 689 IPR011009 -
Accr10g01199 711 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 515 704 - -
Accr10g01199 711 Coils Coil 623 646 - -
Accr10g01199 711 Gene3D Transferase(Phosphotransferase) domain 1 515 596 - -
Accr10g01199 711 SUPERFAMILY L domain-like 44 296 - -
Accr10g01199 711 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 91 689 - -
Accr10g01199 711 Pfam Leucine rich repeat 131 190 IPR001611 GO:0005515
Accr10g01199 711 Pfam Leucine rich repeat 200 259 IPR001611 GO:0005515
Accr10g01199 711 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 201 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01199 Accr-Chr10 34418718 34421706 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01199 26 622 Miscellaneous Gene Families AT2G02780 47.937 1.20e-175 516
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Accr10g01199 Pkinase 5.5e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01199 - - qsa:O6P43_025427 835.869