Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01191 ATGGGTAACTTTCTACATTCTTCTACCAAAGTAGATACATCTCAGAGTACCCGAACTTCTGGATCTGGAATTTCAAAAACTAGCCCTTCATCTGCTGCACCTTCCACCTTATCACTTCCATCTAGTGAAAAAGGCAATGCCTCAAGTCTTCTCACACCAAGGTCGGAGGGTGAAATCTTGTCTTCTCCGAATCTAAAGGCCTTTACATTCAATGACCTAAAGACTGCCACCAGAAATTTTCGTCCTGATGGCCTTCTTGGTGAAGGCGGATTTGGCTATGTTTACAAGGGATGGATTGATGAACACACGTTCCAGGCTGCAAGACCTGAAAGCATGGTTGTTGCTGTGAAAATGCTAAAACCTGAAGGCAGCTTTCAAGGTCACAAGGAGTGGTTGACTGAAGTTAACTACCTTGGGCAACTACACCATGTGAATCTGGTTAAATTAATTGGGTACTGCTTGGAGGGAGAGAACAGGTTATTGGTCTATGAGTTTATGCCCAAAGGGAGCTTAGAAAACCATCTCTTTGGAAGAGGGCCTCATCCACTCTCTTGGTCAGTGAGGATGAAAGTGGCCATTGGGGCTGCCAGAGGGCTATCTTTTCTTCATAACGCCAAATCGCAAGTCATATACCGTGATTTTAAATCTTCCAACATCCTACTTGATGCTGACTTCAATGCTAAACTATCTGATTTTGGCTTAGCTAGGGCAGGTCCTACTGGCGATAAAACTCATGTGACTACTCAAGTTATGGGCACTCATGGATATGCAGCTCCTGAATATGTTGCTACAGGTCGGTTGACAGCGAAGAGTGATGTGTATAGCTTTGGGGTTGTGTTGCTTGAACTTTTATCTGGACGGCGTGCAGTTCAGAGATCGGAAGCTGGTGTGGAGCTAAATCTGGTAGATTGGGCAAAACCATATTTGGGTGACAAACGAAAACTTTTCCGCATTATGGACACCAAGTTGGAGGGCCAATACCCTCAAAACGTAGCCTACACAGCCACAACTCTTGCTCTACAATGCTTGAATGGTGACGCCAAGGCAAGGCCTCCAATGACCGAGGTCTTAGCAACACTCAAACAGATCGAAGCCCCCAAGAATGCAGGCCGACATTACCACTCAGAGCCACCGATAGCCCACGTTCCTATAAGGAGCTCTCCTGCGCGAACCAGGGAACACTAA 1185 0.4608 MGNFLHSSTKVDTSQSTRTSGSGISKTSPSSAAPSTLSLPSSEKGNASSLLTPRSEGEILSSPNLKAFTFNDLKTATRNFRPDGLLGEGGFGYVYKGWIDEHTFQAARPESMVVAVKMLKPEGSFQGHKEWLTEVNYLGQLHHVNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFGRGPHPLSWSVRMKVAIGAARGLSFLHNAKSQVIYRDFKSSNILLDADFNAKLSDFGLARAGPTGDKTHVTTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVQRSEAGVELNLVDWAKPYLGDKRKLFRIMDTKLEGQYPQNVAYTATTLALQCLNGDAKARPPMTEVLATLKQIEAPKNAGRHYHSEPPIAHVPIRSSPARTREH 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01191 394 SUPERFAMILY Protein kinase-like (PK-like) 55 359 IPR011009 -
Accr10g01191 394 MobiDBLite consensus disorder prediction 370 394 - -
Accr10g01191 394 Pfam Protein tyrosine and serine/threonine kinase 86 359 IPR001245 GO:0004672|GO:0006468
Accr10g01191 394 PANTHER OS01G0588500 PROTEIN-RELATED 27 364 - -
Accr10g01191 394 Gene3D Transferase(Phosphotransferase) domain 1 166 377 - -
Accr10g01191 394 Gene3D Phosphorylase Kinase; domain 1 56 165 - -
Accr10g01191 394 CDD STKc_IRAK 86 363 - -
Accr10g01191 394 FunFam Serine/threonine-protein kinase BIK1 47 165 - -
Accr10g01191 394 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
Accr10g01191 394 ProSiteProfiles Protein kinase domain profile. 80 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g01191 394 ProSitePatterns Protein kinases ATP-binding region signature. 86 117 IPR017441 GO:0005524
Accr10g01191 394 MobiDBLite consensus disorder prediction 1 55 - -
Accr10g01191 394 FunFam Serine/threonine-protein kinase PBS1 166 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01191 Accr-Chr10 34178045 34181777 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01191 4 360 Glycoside Hydrolase AT3G07070 45.304 1.13e-104 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Accr10g01191 PK_Tyr_Ser-Thr 6.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01191 - - gmx:100809778 621.698