Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01187 ATGAGGAAGCTGAAGCAGCAGCTGGGTAAGCAAGAAGAATCTCAGAAGAAGGAGCGTCATATTGTGACGTGGACACAAGAGGAAGATGATACATTGAGGAAGCAGATAAGCATCCATGGAACTGAGAATTGGGCAATAATTGCATCTAACTTCAAAGACAAAACGACAAGACAGTGCAGAAGAAGATGGTACACTTACTTGAACTCTGATTTCAAGAAAGGAGGATGGTCACCGGAGGAAGACTTGCTGTTATGTGAGGCTCAGAAAATATTTGGCAACAGATGGACAGAAATAGCAAAGGTGGTTTCAGGCAGAACCGATAACGCTGTGAAAAACCGTTTCTCCACTTTGTGCAAGAAGAGAGCAAAATTTGAGGCCTTGGCAAAAGAGAATAACACTTCATTCATTAATTCAAATAACAAGAGGACTATTTTCCAACAGGGTGATAACAGAGAGTCAACATCTGAGGCTGCACCACCTGCTAAGAAAATGAGGAGAGCTCATATCCCTGATGCTGCAGAAAAGATCAACCATGGAGACAGGTCCCATAAGCATTATGAAGCAACAATAAAACAGCAGCCAAGAGCACCGTTTTCTATTTTGGCTCAGAATTTGACAGATCAGCATGAAGACTCCGATGACAAGATCAGCAGAAATGCCCATAATTCCAAAACTCAAGGAACATTTCTTAAAGAGGATGACCCAAAGATTAGCATGTTGATGCAACAAGCGGAGTTATTAAGTTCGCTAACTCTAAAAGTTAATACAGATGATGTGGACCAGAGTCTTGAAGACGCATGGAAGGTACTTCAAGAGTTTCTGAACCAAACCAAAGAATCAGACATTCTCAAATATAAGATTTCGGATTTACAGCTCGTAGATCTTAAATATATGATGGAGGAATTTAAGAGTGGTAATGAGGGAAGCCAGCAATGTTGGAGGCAACCAGAACTATATGAAGACTCTCCAAGCAGTTCTGAATACAGCACAGGATCAACGCTTCTGCCCCATTCAGCAAGTGATAATCTGGAACACTCTCTGCTTCAGGATATTGGAACTGATCTAAAGCCTGTCCAACTAGGAGATCAAAAAGTAGTTAATGAATGTGGCAAAGAGGATCTCACTTCTGCAACTGTAGGTCAAGTGGCAGATGTGTTTCCATCTTGTGAGGAACAGATAAGCAATGATGGGATCGCTTCTACCTCATCAAGCACAGAGTTTAATTCCCCTCTTCAAGTTACCCCTCTGTTCAGATCCTTGGCTGCTGGAATTCCCAGCCCACAGTTTTCAGAAAGTGAAAGGAACTTCCTAATGAGGACGCTTGGATTGGAGTCCCCATCCATGAACCCAAGTGCCAACCCCTCACAACCACCACCCTGCAAAAGAGCCCTACTAAACAGTCTATAA 1407 0.4257 MRKLKQQLGKQEESQKKERHIVTWTQEEDDTLRKQISIHGTENWAIIASNFKDKTTRQCRRRWYTYLNSDFKKGGWSPEEDLLLCEAQKIFGNRWTEIAKVVSGRTDNAVKNRFSTLCKKRAKFEALAKENNTSFINSNNKRTIFQQGDNRESTSEAAPPAKKMRRAHIPDAAEKINHGDRSHKHYEATIKQQPRAPFSILAQNLTDQHEDSDDKISRNAHNSKTQGTFLKEDDPKISMLMQQAELLSSLTLKVNTDDVDQSLEDAWKVLQEFLNQTKESDILKYKISDLQLVDLKYMMEEFKSGNEGSQQCWRQPELYEDSPSSSEYSTGSTLLPHSASDNLEHSLLQDIGTDLKPVQLGDQKVVNECGKEDLTSATVGQVADVFPSCEEQISNDGIASTSSSTEFNSPLQVTPLFRSLAAGIPSPQFSESERNFLMRTLGLESPSMNPSANPSQPPPCKRALLNSL 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01187 468 SMART sant 20 69 IPR001005 -
Accr10g01187 468 SMART sant 72 120 IPR001005 -
Accr10g01187 468 Gene3D - 11 72 - -
Accr10g01187 468 CDD SANT 76 117 IPR001005 -
Accr10g01187 468 Gene3D - 75 150 - -
Accr10g01187 468 Pfam Myb-like DNA-binding domain 24 83 - -
Accr10g01187 468 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 67 IPR017930 -
Accr10g01187 468 MobiDBLite consensus disorder prediction 443 468 - -
Accr10g01187 468 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 68 122 IPR017930 -
Accr10g01187 468 ProSiteProfiles Myb-like domain profile. 24 67 IPR001005 -
Accr10g01187 468 SUPERFAMILY Homeodomain-like 20 114 IPR009057 -
Accr10g01187 468 ProSiteProfiles Myb-like domain profile. 68 118 IPR001005 -
Accr10g01187 468 PANTHER MYB PROTEIN-RELATED 23 181 - -
Accr10g01187 468 CDD SANT 23 67 IPR001005 -
Accr10g01187 468 MobiDBLite consensus disorder prediction 306 332 - -
Accr10g01187 468 FunFam Transcription factor MYB124 16 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01187 Accr-Chr10 34155254 34159879 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01187 62 468 MYB Transcription Factor Family AT1G14350 52.439 2.72e-137 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr10g01187 Myb_DNA-bind_6 1.7e-14 CL0123