Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01185 ATGGCTCTCTTTCCAGCAAATTTCATATTACAGAACTCTCACCAAGAAGATCACCACCATCAACTTCCACCGTCTCTCAACTCAATTCTGCCTCAAGATTATCATGGAGGAGCTTCACTTTTAGGGAAGAGATCTATGACATTTTCAGGACTTGAACTTGGAGGAGGAGAAGAAGCAAACAATGGTTGTGAAGAAGACTTGTCTGATGATGGATCTCAGGCAGGGGAGAAGAAGAGAAGGCTCAACATGGAACAAGTGAAGACACTTGAGAAAAGCTTTGAACTTGGCAACAAGCTTGAGCCTGAGAGGAAAATGCAGCTGGCTAGAGCTCTTGGCTTGCAGCCAAGGCAGATTGCTATATGGTTTCAGAACAGAAGAGCAAGATGGAAGACAAAGCAGTTAGAGAAAGACTATGATCTTCTCAAAAGACAGTATGAAGCTGTCAAAGCAGATAATGACGCCCTTCAAGCTCAAAACCAAAAACTCCAGGCTGAGATATTGGCACTGAAAAGCAGAGAAGTACCAACTGAATCTATAAACCTGAATAAGGAAACAGAGGGATCATGTAGCAATAGGAGCGAGAATAGCTCAGATATTAAGTTGGATATCTCAAGAACACCTGCTATAGACAGTCCTTTATCTACTCATCATCATCAAATTACAAGCAGACCCTTGTTCCCGTCATCAACAACAACAAATTCTAATTCTGCTGCTGCTAGGCCTTCTTCAGGAGGAGTGGCTCAGCTTTTTCAAACATCTTCAAGACCAGACCTTCATCAGAAGAATAATATTGATCATATGGTCAAAGAAGAGAGCTTGAGCAACATGTTTTGTGGGATTGATGATCAAACAGGGTTCTGGCCTTGGTTGGAGTAG 876 0.4224 MALFPANFILQNSHQEDHHHQLPPSLNSILPQDYHGGASLLGKRSMTFSGLELGGGEEANNGCEEDLSDDGSQAGEKKRRLNMEQVKTLEKSFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADNDALQAQNQKLQAEILALKSREVPTESINLNKETEGSCSNRSENSSDIKLDISRTPAIDSPLSTHHHQITSRPLFPSSTTTNSNSAAARPSSGGVAQLFQTSSRPDLHQKNNIDHMVKEESLSNMFCGIDDQTGFWPWLE 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01185 291 PRINTS Lambda-repressor HTH signature 103 112 IPR000047 GO:0003677
Accr10g01185 291 PRINTS Lambda-repressor HTH signature 112 128 IPR000047 GO:0003677
Accr10g01185 291 MobiDBLite consensus disorder prediction 178 246 - -
Accr10g01185 291 ProSitePatterns 'Homeobox' domain signature. 107 130 IPR017970 GO:0000981|GO:0006355
Accr10g01185 291 MobiDBLite consensus disorder prediction 52 80 - -
Accr10g01185 291 SMART HOX_1 75 136 IPR001356 GO:0003677
Accr10g01185 291 FunFam Homeobox-leucine zipper protein ATHB-13 69 136 - -
Accr10g01185 291 Pfam Homeodomain 77 130 IPR001356 GO:0003677
Accr10g01185 291 Gene3D - 69 138 - -
Accr10g01185 291 ProSiteProfiles 'Homeobox' domain profile. 72 132 IPR001356 GO:0003677
Accr10g01185 291 Coils Coil 124 172 - -
Accr10g01185 291 CDD homeodomain 77 133 IPR001356 GO:0003677
Accr10g01185 291 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 57 215 IPR045224 GO:0003700
Accr10g01185 291 Pfam Homeobox associated leucine zipper 132 172 IPR003106 GO:0006355|GO:0043565
Accr10g01185 291 SUPERFAMILY Homeodomain-like 71 134 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01185 Accr-Chr10 34072455 34074107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01185 1 291 Homeobox Transcription Factor Family AT1G69780 62.126 2.01e-113 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Accr10g01185 Homeodomain 1.5e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01185 K09338 - gmx:100814080 444.121