Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01177 ATGATCATGGAGGAGGCAGATCATTCTAATGGGATCCGCAGACCCAATTTCCCACTTCAGCTTTTGGAGAAAAAAAATGGTGATCACCAGCGACACGATGATGGTGGTGATGGTGACCCGACCCGACCCAATAGTAACATCCAGCTTGCCGACCAATCCAAGAAGCCGCTTGCAAAGCGGGCGTCCACTAAGGACAGGCACACGAAAGTGGACGGTCGGGGCCGTCGGATCCGTATGCCGGCGGCTTGTGCTGCCCGAGTTTTTCAGCTGACCAAGGAGCTCGGCCATAAGTCCGACGGCGAGACCATCGAGTGGCTGCTCCAACAGGCCGAACCCGCTGTAATCGCCGCCACCGGGACTGGGACCATTCCCGCCAATTTCACTTCCCTTAACATCTCCCTCCGCAGCTCCGGCTCGACCGTGTCGGCGCCGTCGCAATACTTTAGGGGTAATAGTTATAGTAACTACTTCAGTCCCAGCTTGTTCTCTTCATCGTTGCAGTTGAGAAACACGGTAGCGGCGGATGATTCTAGAAGGATCTTGTTTCCCGAGAATTCTTCGATGAATAATAATTTCAGTTCTGCGAGCAATGTGAATGCCATGTTACAACTATCAAAGCAAGAGCTGAGAGAAGAATCTGGTGGAGGTGGCGGCGGCCTTGAATCGACGACGACGACAGAATCCGAAGGAAGTTTAGGTAAAAAGAGACGGTCATCACCAGAACAGGATCAGGAACTACCACAGATTAATAATCAGATAGGCAGTTATTTGTTACAATCCAGCACAGGCTCAATTCCGGCGAGTCATTCATCGGTTCCGGCATCGTTTTGGATGGTAAGTAATAGCCCCGCCGGAAACAACCAATCCATTGGCAGCAGTGGCGGCAGCGGCAACGGCGGAAGTAGTAGTGGTGGCGGCGATCCGATATGGGCAATTCCTTCTGTTGGTAATTACAGTAACATGTATAGAGGAGCCATGTCTAGCAGTGGGATTCATTTCATGAATTTTGGTTCTCCAATGGCTCTTATGGGTGGAGCTCAATTAGGAGGTACAGTGATGAACGAAAGCAACTTAGGCATGCTCGCAGCCCTAAATGCGTACAGGCAGATTCCTACGAGCGGCGTCTCAGAGTCTCCGGCGATCACTGGGCACGGAGGAGGAGGAGGAGGTGAGCAATAA 1179 0.5174 MIMEEADHSNGIRRPNFPLQLLEKKNGDHQRHDDGGDGDPTRPNSNIQLADQSKKPLAKRASTKDRHTKVDGRGRRIRMPAACAARVFQLTKELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSTVSAPSQYFRGNSYSNYFSPSLFSSSLQLRNTVAADDSRRILFPENSSMNNNFSSASNVNAMLQLSKQELREESGGGGGGLESTTTTESEGSLGKKRRSSPEQDQELPQINNQIGSYLLQSSTGSIPASHSSVPASFWMVSNSPAGNNQSIGSSGGSGNGGSSSGGGDPIWAIPSVGNYSNMYRGAMSSSGIHFMNFGSPMALMGGAQLGGTVMNESNLGMLAALNAYRQIPTSGVSESPAITGHGGGGGGEQ 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01177 392 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 38 359 IPR005333 GO:0003700
Accr10g01177 392 MobiDBLite consensus disorder prediction 373 392 - -
Accr10g01177 392 Pfam TCP family transcription factor 62 245 IPR017887 -
Accr10g01177 392 MobiDBLite consensus disorder prediction 57 76 - -
Accr10g01177 392 MobiDBLite consensus disorder prediction 24 39 - -
Accr10g01177 392 MobiDBLite consensus disorder prediction 1 76 - -
Accr10g01177 392 MobiDBLite consensus disorder prediction 208 246 - -
Accr10g01177 392 ProSiteProfiles TCP domain profile. 63 117 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01177 Accr-Chr10 33881405 33882583 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01177 53 355 TCP Transcription Factor Family AT3G47620 44.706 6.59e-56 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Accr10g01177 TCP 2.9e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01177 - - qsa:O6P43_025447 394.045