Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01176 ATGATCATGGAGGAGGCAGATCATTCTAATGGGATCCGCAGACCCAATTTCCCACTTCAGCTTTTGGAGAAAAAAAATGGTGATCACCAGCGACACGATGATGGTGGTGATGGTGACCCGACCCGACCCAATAGTAACATCCAGCTTGCCGACCAATCCAAGAAGCCGCTTGCAAAGCGGGCGTCCACTAAGGACAGGCACACGAAAGTGGACGGTCGGGGCCGTCGGATCCGTATGCCGGCGGCTTGTGCTGCCCGAGTTTTTCAGCTGACCAAGGAGCTCGGCCATAAGTCCGACGGCGAGACCATCGAGTGGCTGCTCCAACAGGCCGAACCCGCTGTAATCGCCGCCACCGGGACTGGGACCATTCCCGCCAATTTCACTTCCCTTAACATCTCCCTCCGCAGCTCCGGCTCGACCGTGTCGGCGCCGTCGCAATACTTTAGGGGTAATAGTTATAGTAACTACTTCAGTCCCAGCTTGTTCTCTTCATCGTTGCAGTTGAGAAACACGGTAGCGGCGGATGATTCTAGAAGGATCTTGTTTCCCGAGAATTCTTCGATGAATAATAATTTCAGTTCTGCGAGCAATGTGAATGCCATGTTACAACTATCAAAGCAAGAGCTGAGAGAAGAATCTGGTGGAGGTGGCGGCGGCCTTGAATCGACGACGACGACAGAATCCGAAGGAAGTTTAGGTAAAAAGAGACGGTCATCACCAGAACAGGATCAGGAACTACCACAGATTAATAATCAGATAGGCAGTTATTTGTTACAATCCAGCACAGGCTCAATTCCGGCGAGTCATTCATCGGTTCCGGCATCGTTTTGGATGGTAAGTAATAGCCCCGCCGGAAACAACCAATCCATTGGCAGCAGTGGCGGCAGCGGCAACGGCGGAAGTAGTAGTGGTGGCGGCGATCCGATATGGGCAATTCCTTCTGTTGGTAATTACAGTAACATGTATAGAGGAGCCATGTCTAGCAGTGGGATTCATTTCATGAATTTTGGTTCTCCAATGGCTCTTATGGGTGGAGCTCAATTAGGAGGTACAGTGATGAACGAAAGCAACTTAGGCATGCTCGCAGCCCTAAATGCGTACAGGCAGATTCCTACGAGCGGCGTCTCAGAGTCTCCGGCGATCACTGGGCACGGAGGAGGAGGAGGAGGGTACGGATCCAAAACCTTAACAACGAAAGAAGGCTCAATCTCAAAGCGGCAGGAGCGACTATGA 1233 0.5166 MIMEEADHSNGIRRPNFPLQLLEKKNGDHQRHDDGGDGDPTRPNSNIQLADQSKKPLAKRASTKDRHTKVDGRGRRIRMPAACAARVFQLTKELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSTVSAPSQYFRGNSYSNYFSPSLFSSSLQLRNTVAADDSRRILFPENSSMNNNFSSASNVNAMLQLSKQELREESGGGGGGLESTTTTESEGSLGKKRRSSPEQDQELPQINNQIGSYLLQSSTGSIPASHSSVPASFWMVSNSPAGNNQSIGSSGGSGNGGSSSGGGDPIWAIPSVGNYSNMYRGAMSSSGIHFMNFGSPMALMGGAQLGGTVMNESNLGMLAALNAYRQIPTSGVSESPAITGHGGGGGGYGSKTLTTKEGSISKRQERL 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01176 410 MobiDBLite consensus disorder prediction 57 76 - -
Accr10g01176 410 MobiDBLite consensus disorder prediction 24 39 - -
Accr10g01176 410 MobiDBLite consensus disorder prediction 377 410 - -
Accr10g01176 410 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 38 385 IPR005333 GO:0003700
Accr10g01176 410 MobiDBLite consensus disorder prediction 1 76 - -
Accr10g01176 410 MobiDBLite consensus disorder prediction 208 246 - -
Accr10g01176 410 ProSiteProfiles TCP domain profile. 63 117 IPR017887 -
Accr10g01176 410 Pfam TCP family transcription factor 62 245 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01176 Accr-Chr10 33881405 33884143 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01176 53 355 TCP Transcription Factor Family AT3G47620 44.412 1.16e-55 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Accr10g01176 TCP 3.2e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01176 - - qsa:O6P43_025447 394.045