Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01143 ATGAAGGCAGCTTGGAGGAACTCTCTGGTATATTCTTCAAAAGAACACTCCAATAGTGCTCTTACCTCTTGTGATCTCTCGTCTTCTTCGATGGGGATGGTTTATGCAGACATGGGATCTCTTTCTCTTTCTTCTTCTTCTTCTGAAATGGGAAATAACAACAATATTGGGGGAACCAGCTGGCCTACTTTTCCCTTTATTACTAGGGATCATCATCTTCCCAACAACGACAACAACAACACCGATAATGACAACGATATTGCTTTGGAGTGTAAGGCTTCTGACCAATCTAGTACTGATCAGGACAATCTGATCATAGATCACACCCAAGAAAACCCTAACGAGAATTCTTCTGGTATTAGCACTGGAAAAGTAGAAGCTGATTCTGGGCAGTCCAAGCTTTGTGCACGAGGCCATTGGAGACCTGCTGAAGACGCCAAGCTTAAAGAGCTCGTCGCTCTCTATGGCCCTCAGAACTGGAACCTCATTGCAGAAAAGTTAGAAGGAAGATCAGGTAAGAGCTGTAGGCTGAGGTGGTTTAACCAGTTGGATCCGAGGATAAACCGGAGGGCGTTTACTGAGGAAGAAGAGGATAGGCTAATGCAGGCACATAGGATATATGGGAACAAATGGGCCATGATTGCTAGATTATTCCCAGGAAGAACCGATAATGCTGTGAAGAATCACTGGCATGTTATAATGGCCAGGAAGTACAGAGAACAATCTAGTGCTTACAGAAGGAGAAGGTTAAGTCAACCCGCAAGATACACAAGATCATCAATGGCGGACCAAAATTCAAGCTCAGTCACAGAACAACCGCCACCTCCACCTTATTGTCTTGTCCCCAACAATAACAACGTAACGACTAGTTTCCCCTATGGTCACTTCCATGGAGCTAATGGTGGGGTTGACTATGGCTTCAATGATATTGCTTCACCCCACATGGCTGGTGCATTACAAGCATTCTCCAGCAGCAGCAAGCAGGCCCCTCATCACACCGCCTTTTATGCTCATCCTCCATCTTTTGATGTCATCTCTGGTGTTAGGGGCAATGACATGATATATAGGGAAAACAGGCCAAGTGATTATGAACTTCATAATTCTCTTAATGGCTTCTTCTATCCTCATCAAGAAGATAATTTCAACCCGTATTTGATGCCAATAATGCAGCAGCAGCATCTACTACCACAGTCAAACTCAAACATTATAAATCCCAGTTTTCACAGCTTCTCATCATCAAATTCCAAAGCTCCAAATGTTTCCTCCGGCGAACCATCGTCGTCAGAGAACAGAGATAAAGTACTGACTCATCCTTCTCCTCCTCCATTTATCGACTTTCTCGGAGTTGGAGCCACATAA 1359 0.4422 MKAAWRNSLVYSSKEHSNSALTSCDLSSSSMGMVYADMGSLSLSSSSSEMGNNNNIGGTSWPTFPFITRDHHLPNNDNNNTDNDNDIALECKASDQSSTDQDNLIIDHTQENPNENSSGISTGKVEADSGQSKLCARGHWRPAEDAKLKELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFTEEEEDRLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSSAYRRRRLSQPARYTRSSMADQNSSSVTEQPPPPPYCLVPNNNNVTTSFPYGHFHGANGGVDYGFNDIASPHMAGALQAFSSSSKQAPHHTAFYAHPPSFDVISGVRGNDMIYRENRPSDYELHNSLNGFFYPHQEDNFNPYLMPIMQQQHLLPQSNSNIINPSFHSFSSSNSKAPNVSSGEPSSSENRDKVLTHPSPPPFIDFLGVGAT 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01143 452 ProSiteProfiles Myb-like domain profile. 137 183 IPR001005 -
Accr10g01143 452 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 137 183 IPR017930 -
Accr10g01143 452 PANTHER MYB PROTEIN-RELATED 137 278 - -
Accr10g01143 452 MobiDBLite consensus disorder prediction 405 444 - -
Accr10g01143 452 MobiDBLite consensus disorder prediction 405 434 - -
Accr10g01143 452 Gene3D - 190 264 - -
Accr10g01143 452 ProSiteProfiles Myb-like domain profile. 184 234 IPR001005 -
Accr10g01143 452 SMART sant 188 236 IPR001005 -
Accr10g01143 452 SMART sant 136 185 IPR001005 -
Accr10g01143 452 Pfam Myb-like DNA-binding domain 189 232 IPR001005 -
Accr10g01143 452 Pfam Myb-like DNA-binding domain 137 183 IPR001005 -
Accr10g01143 452 SUPERFAMILY Homeodomain-like 137 230 IPR009057 -
Accr10g01143 452 CDD SANT 140 181 IPR001005 -
Accr10g01143 452 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 184 238 IPR017930 -
Accr10g01143 452 MobiDBLite consensus disorder prediction 244 277 - -
Accr10g01143 452 CDD SANT 191 231 IPR001005 -
Accr10g01143 452 MobiDBLite consensus disorder prediction 254 269 - -
Accr10g01143 452 FunFam MYB transcription factor 190 261 - -
Accr10g01143 452 Gene3D - 137 188 - -
Accr10g01143 452 FunFam MYB transcription factor 137 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01143 Accr-Chr10 33471410 33473131 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01143 24 249 MYB Transcription Factor Family AT1G69560 54.113 6.76e-77 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr10g01143 Myb_DNA-binding 1.7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01143 K09422 - vvi:100253313 350.903