Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01140 ATGGATATGAAAAACTTGCAAAACCAAAGTATGGATTTGGTTCTGTCCACTGATGCAAAGCCTAGGCTGAAATGGACTCCTGAGCTTCACCGAAGATTTCTTGACGCCATTAAACAGCTTGGAGGGCCAGATAAGGCAACACCTAAGAGTCTTTTGAGAGTGATGGGCATTCCAGGGCTTACTTTGTACCACCTGAAGAGCCACTTACAGAAATTCAGGATTGGAAAAAGCCAGCAACTAGAAACCTGCCCTGACAGTAAACAAGACCACAGAGAAATCCAGAGCAGTGTCAGCCATTGCAAAAGGGAAATCTGTATTGGGACCCAGAATCAGATGACTGACTTGCAGATAGCTCAGGCTCTTCAAATGCAAATGGAAGCACAGGGAAAACTTTATGAACAACTTGAGGTGCAGAGGCATTTGCAGCTTCGAATTGAAGCTCAAGGGAAATATTTACAATCAGTGCTCAAGAAAGCACAGGAAACACTTGCTGCTTATAGTTCTTCCACTTCTGGTACACAACTTGCAAAAGCTGAGCTTTCTCGGTTAGTGTCCCTGATCAACAATGCTGTTCCAAGTTCTCCGATCTCAGAACTGACAGAAACAAGAGGGTTGAGTTCTAAAGATGGGAAGAGGAAGCAAAGCAGAGGGATTATGTGTTCACTGGAGAGTTCTTTGACATCTTCTGAGAGCTCAGGAATAAAAGAATACAAGAAGCAGCCCAAAGATGAAACAGGAGACCTTAAAAAATCTAATAGTACCACTTCAGTTGAACTTCCATTAATGGCTTTTCGTTCAGTGGAGGACGCATTAAATGGGGATGCAAGTGATGAATCTAGTGGGATAAGGAGAAGTGGAGGAGCCAATTATGATGGGGAGACTTGTGCTAGCAAGCAGAGAAAAATTGAATATTCAGAAATGCTTGACTTGAACAGGCAATACCAGAGTGATATTGATTTGAATTGCTAA 969 0.4262 MDMKNLQNQSMDLVLSTDAKPRLKWTPELHRRFLDAIKQLGGPDKATPKSLLRVMGIPGLTLYHLKSHLQKFRIGKSQQLETCPDSKQDHREIQSSVSHCKREICIGTQNQMTDLQIAQALQMQMEAQGKLYEQLEVQRHLQLRIEAQGKYLQSVLKKAQETLAAYSSSTSGTQLAKAELSRLVSLINNAVPSSPISELTETRGLSSKDGKRKQSRGIMCSLESSLTSSESSGIKEYKKQPKDETGDLKKSNSTTSVELPLMAFRSVEDALNGDASDESSGIRRSGGANYDGETCASKQRKIEYSEMLDLNRQYQSDIDLNC 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01140 322 MobiDBLite consensus disorder prediction 218 234 - -
Accr10g01140 322 NCBIfam myb-like DNA-binding domain, SHAQKYF class 20 75 IPR006447 GO:0003677
Accr10g01140 322 Pfam Myb-like DNA-binding domain 22 71 IPR001005 -
Accr10g01140 322 FunFam Myb family transcription factor 19 77 - -
Accr10g01140 322 MobiDBLite consensus disorder prediction 272 293 - -
Accr10g01140 322 Gene3D - 19 77 - -
Accr10g01140 322 Pfam MYB-CC type transfactor, LHEQLE motif 115 162 IPR025756 -
Accr10g01140 322 SUPERFAMILY Homeodomain-like 19 75 IPR009057 -
Accr10g01140 322 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 17 77 IPR017930 -
Accr10g01140 322 MobiDBLite consensus disorder prediction 196 254 - -
Accr10g01140 322 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 7 251 IPR044848 GO:0003700
Accr10g01140 322 Coils Coil 118 138 - -
Accr10g01140 322 MobiDBLite consensus disorder prediction 235 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01140 Accr-Chr10 33432370 33433879 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01140 11 266 G2-like Transcription Factor Family AT1G69580 51.128 4.37e-74 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Accr10g01140 Myb_DNA-binding 1.7e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01140 - - qsa:O6P43_025475 404.831