Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01110 ATGGAGCAAGATCTCCCTCCTGGCTTCAGGTTTTATCCCACTGATGAAGAACTCATCGTCTTCTACCTTCTTAACCAGTACAGATCAAAGCCATGTCCTGCTTCTATCATCCCAGAAGTTGATATCTATAAATTCGATCCTTGGGACTTGCCTGAGAAAGCAGAGTCTGAAGAGAAGGAAAGGTATTTCTTTAGCCCACGAGATAGAAAGTACCCTAATGGAGTGAGACCTAACAGAGCCACTGAGTCTGGGTACTGGAAGGCGACTGGTACAGACAAGGCTATATATAGTAGTGGGTCCAAGCTTATAGGGTTGAAGAAAGCTCTGGTTTACTACAAAGGGAAGCCACCAAAAGGGATCAAGACTAGTTGGATAATGCATGAGTATAGACTCGTTGAATCCAGAACATCACAAGCCAACAAACATGTTGGGACCATGAGATTGGATGACTGGGTTCTGTGCAGGATCTATAAGAAGAAGAATATGGTAGGGAAGACAAAAATGGAGGAGAAACAGGAATTTCCCAGTAGTAGTACTGAGAATGGTAATGAAACATTTACAGGAAATAATTATCTTCAGAATGAGCAAGAAATGATGAAGCTTCTTCTTCCAAGGACTTTTGATAATTATCTGGGATCATCAGTTTCACAGATATTTTCCGATGGACGCTATAATTATTCAACCTTTGATCTTCAAAATCAAGCTTCGACGACCAATTCTGAAATAGTAGACTACTCCTTTGTCAAACCTCGGATATTTCAAGACCATAATTATTATGCAGGGAAGTTTCAAGTGATGAAACAAAGTAGCAGCTTGAACAGCACCCCCCAGCCAATGTTTATGAGCCAAATGTATGATCTGTGA 864 0.4086 MEQDLPPGFRFYPTDEELIVFYLLNQYRSKPCPASIIPEVDIYKFDPWDLPEKAESEEKERYFFSPRDRKYPNGVRPNRATESGYWKATGTDKAIYSSGSKLIGLKKALVYYKGKPPKGIKTSWIMHEYRLVESRTSQANKHVGTMRLDDWVLCRIYKKKNMVGKTKMEEKQEFPSSSTENGNETFTGNNYLQNEQEMMKLLLPRTFDNYLGSSVSQIFSDGRYNYSTFDLQNQASTTNSEIVDYSFVKPRIFQDHNYYAGKFQVMKQSSSLNSTPQPMFMSQMYDL 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01110 287 ProSiteProfiles NAC domain profile. 5 159 IPR003441 GO:0003677|GO:0006355
Accr10g01110 287 Gene3D NAC domain 14 164 IPR036093 GO:0003677|GO:0006355
Accr10g01110 287 MobiDBLite consensus disorder prediction 167 188 - -
Accr10g01110 287 FunFam NAC domain-containing protein 100-like 14 163 - -
Accr10g01110 287 Pfam No apical meristem (NAM) protein 6 131 IPR003441 GO:0003677|GO:0006355
Accr10g01110 287 SUPERFAMILY NAC domain 3 159 IPR036093 GO:0003677|GO:0006355
Accr10g01110 287 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01110 Accr-Chr10 32923974 32925570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01110 5 263 NAC Transcription Factor Family AT1G69490 54.982 4.89e-91 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr10g01110 NAM 5.1e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01110 - - adu:107489303 320.857