Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01096 ATGGAACAGACAGGGGAGTCTAATGGCAAGAAGAAATTCACAGCCCAGAGAAGAAGGAGCTTGAGGGTAGGAACAAACTCTGATGAGCATTATTATTATTATCAGAATCATCAGAATCAGTTTGGTGGGTTATTGTGTAACCAGAATAATAATAATAATAATAAGTATCAGAGGTATTGTCCTGCTCTTCTTCCTCTACCTTCCCTTTTACCACTGCAACTAGCTTTAACTCCACCGTTTACTCAAAACCAAACCTTCAAATCCAAAACCCATTTCCAGAAATATCCATGCAAACTCAATCACAATTCTCCATTGGCTGCTTCCTCAGACAACAACAACAAGCTATCAGAAGAATCCACAGTTTCCCCTGCTGAGGTGGGGCTTCTTCAACTGCAAGCTAAAGGGAAGACATACCTTATAGGAGATGGAGGGAAGAAATTTGTTCCTGCAAGAAAACCACAGATATTAATTGCTGCAAAAAGACCAGACTCTGGTGGCAAAGAAGGTTCTGTGATCTCTCTTCTCGCCAACCACTTCCTCGTGCAATTCGATCCATCTCAAAAGATATACCATTACAATGTTGAAATCACCCCAAATCCCTCCAAGGAAGTTGCCAGAGAAATCAAACAGAAATTGGTTAACAACAATTCTGTGGGTTTTTCTGGTGCTGTGCCTGCATATGATGGGAGGAAGAATCTTTACAGCTCAGTGGAATTCCAGAATGATAAGCTTGAATTCTACATAAGCCTTCCAATCCACTCAACCAAATCGTCGGCATTACCTTATGGAGAAATCTATGACTTGAAAGAGAAGAAAGAACAGCTTAAACTGTTTAGGATAAATATCAAATTAGTTTCTAAGATCGATGGGAAGGAGTTGAACAACTACTTGAACAAAGAGGGAGATGATTGGGTCCCACTTCCACAGGATTATCTTCATGCTTTGGATGTAGTTTTGAGGGAAAACCCGACTGAGAAGTGTGTACCCGTAGGCAGATCATTTTACTCAAGTTCAATGGGAAAAACCAGGGAGATTGGAGGAGGAGCTGTTGGATTTAGAGGGTTCTTTCAGAGTCTTAGACCAACACAACAAGGACTTGCCCTCAATGTAGATTTCTCTGTGACTGCTTTCCATGAAAGCATAGGAGTTATTCCATACTTGCAGAAGCGACTCGAGTTTCTTCGAGATCTTTCTCAAAGGAAGACAGCAAGTTTAACTAGTGAAGAAAGGAAGGAAGTGGAGAAGGCATTGAAGAACATCAGGGTCTTTGTTTGCCACAGAGAAACTGTGCAGAGATACCGCGTCCATGGCTTAACCGAAGAAGCAACAGAAAATCTTTGGTTTGCTGATAGGGATGGAAAGAATTTAAGGCTTGTGACTTACTTCAAAGATCACTATAACTATGACATTCAGTTCAGAAAATTGCCATGCTTGCAAATTAGTAGGAGTAAACCATGTTATCTTCCTATGGAGCTTTGTGTGATCTGTGAAGGTCAGAAATTTCTTGGTAAGTTGTCTGATGATCAGACAGCAAAGATACTGAAGATGGGGTGCCAAAGACCAAGAGAACGAAAAGCCATCATCGAAGAAGTCATGAGAGGGAATGTAGGTCCTACCAGTGGCAACCAGGAAGGAGAATTTGAACTCAGTGTGTCACGCGAAATGACAAGGCTAACCGGGAGGATTCTTCACCCTCCCAAGCTAAAGCTCGGAGATGGAGGTCGGGTAAGAAACATATTTCCTTCGCGCCATGACCGCCAGTGGAACCTTCTTGATGGCCATGTCTTTGAAGGAACTAAAATTGAAAGATGGGCACTAATAAGTTTTGGTGGCACACCTGAGCAGAAGTCTAATATCCCTAGATTCATAAACCAGCTATCTCAAAGGTGTGAACAATTGGGTATTTTCCTTAACAAGAATACAATCATTAGTCCTCAGTTTGAATCAAGCCATGTGCTTAACAATGTTAACCTTTTGGAATCTAAGCTCAAGAAAATCCAGAGAGCCGCCTCGAACAATCTGCAACTTCTTATTTGCATTATGGAGAAAAAACACAAAGGTTACGCAGACCTGAAACGAATTGGTGATACCAGTGTTGGGGTTGTAAGCCAATGTTGCTTGTATCCAAATCTCATCAAGCTAAGTTCACAATTTTTGGCTAATTTGGCCTTAAAAATCAATGCCAAAGTTGGTGGATGCACAGTGGCTCTTTACAATTCACTTCCTTCTCAAATCCCCAGACTGTTTCCGGTCGATGAGCCAGCCATTTTCATGGGTGCTGATGTAACACATCCTCATCCACTCGACGATTTCAATCCATCTATTGCCGCGGTTGTTGGCAGCATGAACTGGCCAACAGCGAACAAGTACGTCTCAAGAATAAGGTCTCAGACACACAGACAAGAGATCATCCAGGATCTTGGTGCAATGGTGGGTGAGTTGCTTGATGATTTTTATCAGGAAGTAAAGAAACTTCCTGGGAGGATAATTTTCTTCAGAGATGGGGTTAGTGAAACACAGTTTTATAAAGTTCTTGAAGAGGAATTGCAATCCATCAGAGTGGCATGTTCCAAATTTCCTGACTACAATCCATTAATTACTTTCGCTGTAGTACAGAAGAGGCACCATACAAGGTTGTTTCCTGCTGAAACAGACCAATCCTTGGATCAAAACCATTTTTCATACGAGAATATTCCCCCGGGGACTGTGGTTGATTCCGTGATCACTCACCCGAAAGAATTTGATTTCTATCTGTGCAGCCACTGGGGCGTGAAAGGAACAAGCAGACCAACTCATTACCATGTCCTGTGGGATGAAAACAAGTTCACTTCTGATGAACTACAGAAGCTGGCTTACAACTTATGTTACACTTTTGTGAGGTGCACCAAGCCAATTTCTTTGGTCCCACCTGTTTATTATGCACATTTGGCAGCTTACAGAGGCAGACTTTACCTAGAGAGATCATCAGAGTCTTCGGGTTTTTACAGAAGTTCATCTACACTATCAAGAGCTGCCCCTCCAAAGACAGTACCTCTTCCAAGACTCAGTGAAAACATCAAGAAGCTCATGTTCTTCTGCTAA 3081 0.42 MEQTGESNGKKKFTAQRRRSLRVGTNSDEHYYYYQNHQNQFGGLLCNQNNNNNNKYQRYCPALLPLPSLLPLQLALTPPFTQNQTFKSKTHFQKYPCKLNHNSPLAASSDNNNKLSEESTVSPAEVGLLQLQAKGKTYLIGDGGKKFVPARKPQILIAAKRPDSGGKEGSVISLLANHFLVQFDPSQKIYHYNVEITPNPSKEVAREIKQKLVNNNSVGFSGAVPAYDGRKNLYSSVEFQNDKLEFYISLPIHSTKSSALPYGEIYDLKEKKEQLKLFRINIKLVSKIDGKELNNYLNKEGDDWVPLPQDYLHALDVVLRENPTEKCVPVGRSFYSSSMGKTREIGGGAVGFRGFFQSLRPTQQGLALNVDFSVTAFHESIGVIPYLQKRLEFLRDLSQRKTASLTSEERKEVEKALKNIRVFVCHRETVQRYRVHGLTEEATENLWFADRDGKNLRLVTYFKDHYNYDIQFRKLPCLQISRSKPCYLPMELCVICEGQKFLGKLSDDQTAKILKMGCQRPRERKAIIEEVMRGNVGPTSGNQEGEFELSVSREMTRLTGRILHPPKLKLGDGGRVRNIFPSRHDRQWNLLDGHVFEGTKIERWALISFGGTPEQKSNIPRFINQLSQRCEQLGIFLNKNTIISPQFESSHVLNNVNLLESKLKKIQRAASNNLQLLICIMEKKHKGYADLKRIGDTSVGVVSQCCLYPNLIKLSSQFLANLALKINAKVGGCTVALYNSLPSQIPRLFPVDEPAIFMGADVTHPHPLDDFNPSIAAVVGSMNWPTANKYVSRIRSQTHRQEIIQDLGAMVGELLDDFYQEVKKLPGRIIFFRDGVSETQFYKVLEEELQSIRVACSKFPDYNPLITFAVVQKRHHTRLFPAETDQSLDQNHFSYENIPPGTVVDSVITHPKEFDFYLCSHWGVKGTSRPTHYHVLWDENKFTSDELQKLAYNLCYTFVRCTKPISLVPPVYYAHLAAYRGRLYLERSSESSGFYRSSSTLSRAAPPKTVPLPRLSENIKKLMFFC 1026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01096 1026 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 153 987 - -
Accr10g01096 1026 MobiDBLite consensus disorder prediction 1 20 - -
Accr10g01096 1026 SUPERFAMILY PAZ domain 375 533 IPR036085 GO:0005515
Accr10g01096 1026 CDD PAZ_argonaute_like 391 496 - -
Accr10g01096 1026 ProSiteProfiles PAZ domain profile. 388 497 IPR003100 GO:0005515
Accr10g01096 1026 FunFam Protein argonaute 7 375 501 - -
Accr10g01096 1026 Pfam Piwi domain 677 983 IPR003165 GO:0003676
Accr10g01096 1026 SMART PAZ_2_a_3 388 528 IPR003100 GO:0005515
Accr10g01096 1026 SMART Piwi_a_2 676 986 IPR003165 GO:0003676
Accr10g01096 1026 Pfam PAZ domain 391 513 IPR003100 GO:0005515
Accr10g01096 1026 FunFam Argonaute 10 562 738 - -
Accr10g01096 1026 FunFam protein argonaute 10-like 745 1026 - -
Accr10g01096 1026 Gene3D - 562 738 - -
Accr10g01096 1026 Gene3D - 749 1026 IPR036397 GO:0003676
Accr10g01096 1026 SUPERFAMILY Ribonuclease H-like 661 986 IPR012337 -
Accr10g01096 1026 SMART DUF1785_2 328 380 IPR014811 -
Accr10g01096 1026 Pfam Argonaute linker 1 domain 329 378 IPR014811 -
Accr10g01096 1026 Gene3D paz domain 374 501 - -
Accr10g01096 1026 ProSiteProfiles Piwi domain profile. 676 986 IPR003165 GO:0003676
Accr10g01096 1026 Pfam N-terminal domain of argonaute 172 319 IPR032474 -
Accr10g01096 1026 CDD Piwi_ago-like 546 985 IPR045246 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01096 Accr-Chr10 32509385 32513150 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01096 166 1026 Eukaryotic Initiation Factors Gene Family AT1G48410 41.472 0.0 641
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01096 K11593 - gmx:100796107 1652.49