Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01090 ATGCGTGGAACTGGTGACCAACTGCCACCCTCGTCGGAGCCTCCTCCGCCGCCACGCACCTCCATGGACACGCTTTTTAATGGTGTTTCCTCTGGGGGTGCCGGCTTTGGATTTAACAGCCCCGGTCCTATGACTCTGGTTTCCAATTTCTTCAACGAGAACGACGACTTCAAGTCCTTCTCTCAACTTCTCGCCGGCGCTATGCCTCTGTCTCCATTGACGACGGATGGTAGCGCCAGCAGCACTGGGCTTAAGGAGCAGCTGCAGATGTTCATGGTTAGCCCTGCCGGCTACAACGGTCCCCCTAGACTTTTTCCAGCTTCTCAGGTCTCGGCTCCAGCGGTGCCAGTCAACGAGCATACATCATCGGCGGCGGAATCCATGGCTAAACAAGTTGACTTGCCGAGGAGCTCATCAATTCCAGATTCCGGTACGACGTCAATGAAGGAATGTCCTAATGATGGATTCAACTGGCGCAAGTATGGGCAGAAACAGGTGAAAGGGAGTGAATTTCCTCGGAGTTATTACAAGTGTACGCATCCGAACTGTGGCGTGAAGAAGAAGGTGGAGAGATCGATCGACGATGACCATGTGGTGGCCATCATTTACAAAGGACAACATAATCATCAACCTCCTCGCCCCACGAACAAGGGCGCGACCTGCTGGGATCAGTCATCAGCGGCTGAACATGAAGCAGAAGGATTGAGTGAGAGTGATGAGGAAGATGCTGAAGTGGAGCAGGAGAAAAATGATGAGCCTGACCTAAAGAAGAGGAGAAATACACAAGGTATGGTGGCGTCGGAGGGAGTGACTTCGCATAGAACAGCCATGGAGCCAAGGATCATTGTGCAGACAACAAGCGAGGTTGACCTGCTAGACGATGGGTATAGATGGCGAAAATATGGCCAAAAACTTGTTAAAGGCAGTCCTTTCCCTAGGAGTTACTACAAGTGCACGACCACAGGCTGCAATGTTCGGAAGCATGTTGAGAGGGCAACATCAGATCCAAAAGCTGTCATTACAACATATGAAGGAAAACACAATCACGAAGTGCCAGCAGCTAAAACTAACAGCCACACCTTCGCCAACAGCTCTGCATCATCACAGCTTAGACCCCACAATTCCACAATACCAGACAGACAAAGTTTCAACCAGCAGCAGCAACATCAGCCTGTGGCACGTCTTAGGTTGAAGGAAGAACAGATAGCCTAG 1212 0.5091 MRGTGDQLPPSSEPPPPPRTSMDTLFNGVSSGGAGFGFNSPGPMTLVSNFFNENDDFKSFSQLLAGAMPLSPLTTDGSASSTGLKEQLQMFMVSPAGYNGPPRLFPASQVSAPAVPVNEHTSSAAESMAKQVDLPRSSSIPDSGTTSMKECPNDGFNWRKYGQKQVKGSEFPRSYYKCTHPNCGVKKKVERSIDDDHVVAIIYKGQHNHQPPRPTNKGATCWDQSSAAEHEAEGLSESDEEDAEVEQEKNDEPDLKKRRNTQGMVASEGVTSHRTAMEPRIIVQTTSEVDLLDDGYRWRKYGQKLVKGSPFPRSYYKCTTTGCNVRKHVERATSDPKAVITTYEGKHNHEVPAAKTNSHTFANSSASSQLRPHNSTIPDRQSFNQQQQHQPVARLRLKEEQIA 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01090 403 MobiDBLite consensus disorder prediction 205 277 - -
Accr10g01090 403 FunFam WRKY transcription factor 140 213 - -
Accr10g01090 403 MobiDBLite consensus disorder prediction 234 248 - -
Accr10g01090 403 FunFam WRKY transcription factor 57 278 352 - -
Accr10g01090 403 SUPERFAMILY WRKY DNA-binding domain 284 352 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr10g01090 403 Pfam WRKY DNA -binding domain 293 350 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr10g01090 403 Pfam WRKY DNA -binding domain 153 210 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr10g01090 403 MobiDBLite consensus disorder prediction 359 392 - -
Accr10g01090 403 MobiDBLite consensus disorder prediction 1 34 - -
Accr10g01090 403 SUPERFAMILY WRKY DNA-binding domain 151 212 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr10g01090 403 MobiDBLite consensus disorder prediction 209 223 - -
Accr10g01090 403 SMART WRKY_cls 152 211 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr10g01090 403 SMART WRKY_cls 292 351 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr10g01090 403 Gene3D WRKY domain 139 213 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr10g01090 403 Gene3D WRKY domain 277 353 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr10g01090 403 MobiDBLite consensus disorder prediction 126 151 - -
Accr10g01090 403 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 137 379 IPR044810 GO:0003700
Accr10g01090 403 ProSiteProfiles WRKY domain profile. 147 212 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr10g01090 403 ProSiteProfiles WRKY domain profile. 287 352 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01090 Accr-Chr10 32431964 32434718 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01090 17 64 WRKY Transcription Factor Family AT2G03340 60.417 1.41e-08 54.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Accr10g01090 WRKY 1.3e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01090 - - gmx:100127369 367.466