Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01082 ATGTCAAAGAGAGGTCCCGGTGGTTCGGCCGGAAACAAGTTCCGAATGTCACTAGGTCTACCGGTGGTGGCGACAGTCAACTGTGCCGATAACACTGGAGCTAAGAATCTGAACATCATTTCGGTGAAGGGGATCAAGGACCGCCTTAACCATTTGCCGTCTGCTTGCGTTGGTGACATGGTCATGGCCACTGTGAAGAAAGGGAAGCCTGATCACCGGAAGAAGGTCTTGCCCGCCGTGATCGTACGCCAGCAGAAGCCTTGGAGCAGAAATGACGGTGTTTACATGTATTTTGAAGATAAAGCTGGTGTGATTGTGAAGTTCAACAACGTCCGTTAA 339 0.5044 MSKRGPGGSAGNKFRMSLGLPVVATVNCADNTGAKNLNIISVKGIKDRLNHLPSACVGDMVMATVKKGKPDHRKKVLPAVIVRQQKPWSRNDGVYMYFEDKAGVIVKFNNVR 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01082 112 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 20 107 IPR000218 GO:0003735|GO:0005840|GO:0006412
Accr10g01082 112 Gene3D Ribosomal protein L14 1 111 IPR036853 GO:0003735|GO:0005840|GO:0006412
Accr10g01082 112 Pfam Ribosomal protein L14p/L23e 24 108 IPR000218 GO:0003735|GO:0005840|GO:0006412
Accr10g01082 112 SMART Ribosomal_L14_2 19 111 IPR000218 GO:0003735|GO:0005840|GO:0006412
Accr10g01082 112 SUPERFAMILY Ribosomal protein L14 11 109 IPR036853 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01082 Accr-Chr10 32307193 32307531 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01082 1 106 Cytoplasmic Ribosomal Protein Gene Family AT1G04480 87.736 8.48e-64 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01082 K02894 - gmx:100794110 192.2