Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01060 ATGGAACCCGATATAATTTCCTGGATACTAGAGTTTCTCCTCAGGAGTTCCGTTCCAGATTTACTCCTCAAGAAAGTTTTGAAAAGTTTGCCTCTCTCTCGCATCGATTCGCGGCTATGGAAAACATTGGCTCTCAGATCTATTCAATCCGAGGTGGCTATGGCATCATTTACAGAAAACTCATTGGAATGTCTGGAGGTCATTGAAGAAATCGACAGGCTTGATGGCATTGCTATCACACAAGCCATGAAGGAGGCATACTGTGCTGTTGCTGTGGAATGCAGTGTCAGGCACCTCGGGGCATGCCCAGATAAGAACACCCGCGGCTCGTTTGACGATGCTGTCAATAGGATTTGGAGGGGCCGTGTTCGGCAAATGATGGAGGCGATGGCGTTAGGGAGGAGGAGTAACTTATTTACGCCGGAGTTGATAGGGTGGAAGGATCTCTTAGAGTCTGCACGTTGGGACGCTGAGGTGTGCGGGAGATTAATGAACATGAGTACCAGACAAAATGCAATCGATGAGGTTAGAGTTTATCTAAAAGAAACTTGGGAATCAATGGGCCCTTCTTTTCTTGAGTTAGCAGATATATTGTCGCAAGACAAGGGTTTGGGAAGTTCAAGGGGGGATCAGGTGGGTGACGCGGAGCTTGCTGCTAATATAGCCAATGAAGGTTGTGACAGGGGTGTTTCTGAATCTGTCTTGGTCTCTGATCGGATGAATATGTGTAAAGAAGGGCTACATTGTTCAACTAACACGACTCAGGAGGTTTTAGTTGTGTCTGATGGAAGTGCATTGAATAATGCTGCTATCTGCATGGAGAAGGCGCCAGTGGCAGGTGGGAATCAAGAAAGTGAGCAATTGGGAAAGAGAGTCTTGCCTCAAAGGATAAATGAAGCAATTCAAAAGGGCAAGCTGCCACTTGAATGTAATCATGCTGTGCCCTCTACACGTAGGGGAGTTAAGATTATTGATGCTGAGGAAGAAGGGCCACCGACAGTGTGTAGCAAAAATCACAATGCATCTAATATTCAAGTTGAAAAACTTCGGAAATCTCTCATGTCAAGTTCTTTGGAGTTGCGAGCATTGGTGAAGGATCCTCTTCCTGATGCATTACATAAATCTGATATTGTAAGATCTGAATTAGCAACAAAGGGTGTGAATCAGGAGCCTCCTTTAGAAAACCAGAGTACTGTTGTAAATGTACCAGAACAAAATACTTGCAGGAGCTTGGTGCTTTATCAACCTATCAATGTTATCTTAAAGAAACAGTCTGCTGCTAATTGCAGTAATGTCCAACGTCCCAGCTTGATGGAACGAAATAGTACTGCCCATACTTTTGAGTGGGATGATCCATTTAATGACTTGCCTGGGGGAAGCCCAAAGAAAAGGAGGAGAAAGGCAAGATGGAGTTCTGAAGAAGAGGATGCTTTAAGGGATGGTGTAAAGAAGTTTGGCAAAGGAAATTGGAAGCCAATCCTAAGATTTCACAGTGAGATATTTGCAAAGGCAGGAAGAACAGAAGTTGATTTGAAGGATAAATGGAGAAATTTGACACGGTCGTCATAG 1569 0.4423 MEPDIISWILEFLLRSSVPDLLLKKVLKSLPLSRIDSRLWKTLALRSIQSEVAMASFTENSLECLEVIEEIDRLDGIAITQAMKEAYCAVAVECSVRHLGACPDKNTRGSFDDAVNRIWRGRVRQMMEAMALGRRSNLFTPELIGWKDLLESARWDAEVCGRLMNMSTRQNAIDEVRVYLKETWESMGPSFLELADILSQDKGLGSSRGDQVGDAELAANIANEGCDRGVSESVLVSDRMNMCKEGLHCSTNTTQEVLVVSDGSALNNAAICMEKAPVAGGNQESEQLGKRVLPQRINEAIQKGKLPLECNHAVPSTRRGVKIIDAEEEGPPTVCSKNHNASNIQVEKLRKSLMSSSLELRALVKDPLPDALHKSDIVRSELATKGVNQEPPLENQSTVVNVPEQNTCRSLVLYQPINVILKKQSAANCSNVQRPSLMERNSTAHTFEWDDPFNDLPGGSPKKRRRKARWSSEEEDALRDGVKKFGKGNWKPILRFHSEIFAKAGRTEVDLKDKWRNLTRSS 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01060 522 ProSiteProfiles Myb-like domain profile. 462 519 IPR001005 -
Accr10g01060 522 SMART sant 466 521 IPR001005 -
Accr10g01060 522 Pfam Myb-like DNA-binding domain 469 518 IPR001005 -
Accr10g01060 522 Gene3D - 460 521 - -
Accr10g01060 522 MobiDBLite consensus disorder prediction 448 470 - -
Accr10g01060 522 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 462 522 IPR017930 -
Accr10g01060 522 PANTHER MYB TRANSCRIPTION FACTOR 1 520 - -
Accr10g01060 522 SUPERFAMILY Homeodomain-like 464 520 IPR009057 -
Accr10g01060 522 CDD SANT_TRF 469 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01060 Accr-Chr10 32117685 32120655 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01060 470 518 Single Myb Histone (SMH) Gene Family AT1G15720 59.184 1.61e-08 54.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Accr10g01060 Myb_DNA-binding 7.1e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01060 - K11111 pcin:129285243 761.525