Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01059 ATGGGATCCAAAAGGTGTTTTGAGGCCAATGAATTTGAGGATCTTCCTTTCAATAAGGCGAAACGTTTGGAATGCAATGATGATAAGTTGGTTTCATTTGTTGGTATTGATACTCCCAACAATGCTCCAGTGAAGCTTATTGCTTCAGGGAAAGATGAGTATGGCTTGTGCAATATTCAATGGTATGATGCAATTGAACCAGAGACTGTCACTAGAGGCACACATACTGGCGAGGAGGATATCAAGACCAGTGCCCACCTCAGCAGCAGTTATAGTGAGGATGGTTCTGGTTCTGGGGCAACTTCATTGTCCTCTTCTTTAGATTCATTTGAATTTGATTTTCCGGTGAAAGCAAGTGTTCCTTTGGATGATGCCTATTCAGTTCCTGATGGCTTCCCAAGAAAACCAGTTCCTGTTGGACCAAACCATCAAGCCACCATTCCAGTCTGGAGAGGAAGAGGGACTGAGGTATCAGTGTTGACAGGCACCAATAATGTTGATGGCAATGAACAAAAGTTGATGGGGACTTGTGTAATCTCAATGCCCGACTCCAGCTTCTATTCTTCAGAGAGTCACCAGGATGAAGGCAGAACAGAATGTACCTGCCTGGATCAATACTCCATAAGGTGCGTTCGACAGCATGTTCGGGAAAAACGTGAAAACTTGATGAAGACTCTTGGAAAGGAAACGTTTATGAACTTGGGGTTTGGCCTCATGGGAGAGGAGGTGGTTGCACTCAAATGGAGTGAAGAAGAAGAATATTTATTTCATGAAATTGTCTACACAAATCCTGTGACACTGGGTAGAAACTTTTGGAAGCAGCTCTCAGCTGCATTCCCTTCTCGAACAATGAAGGATATTGTCAGCTATTATTACAATGTCTTTATGCTTCGGAGAAGGGCTGCTCAGAACAGATCCAGGTTTCTCAATGTTGACAGTGACGATGAAGAATCTCCCACAAGCAATAATGTGGGCTTCTATGGTTTTGAAGTTTCAGAAGAAGATGACTCTGCCATTGAGTCTCCTGATGAGCAACATGTCCATGTGGGACACCAAGATAATTATTCTGATGATGATGGTGAAGATGACAACAGCGACAACGGAACTGATGGCGGTTTCATTGATATTGATGGGTATGACAAGGGAAACGTCACTGACTCTAACTATCAGATTGAGAGCTTGTCTGAACCTGTTCAACAAATCAATGAGAATCAGGGGATTTCAGTTGGTTCGGGTGTTCAGGATGATTCTTGCATGTCCTTTGAGTGTCAGATCAATATGGATGAGCCCTGTCCCCCACGTGGTGATCACAATGATGCTAGCCATGCCTTACAAGCTGCTGGATTCAAATGTGATCAGAGCCCACTCATACCTGGCATACTTGATTTCTCCAGTGACAGTTTGGAGCATGTTTATTTTTCCGAGCCCTGTGATGCTAAAGACTGGTACCTGGGGTACTCTGCAGGTCCAGCCTCCGATATTGACTTCTCAGCCACATCCAAATTAATTGAAGAGTTTCTGTGTCAAGTTACTCCAGATCGAAAGACCAAAAACGACTGA 1560 0.4385 MGSKRCFEANEFEDLPFNKAKRLECNDDKLVSFVGIDTPNNAPVKLIASGKDEYGLCNIQWYDAIEPETVTRGTHTGEEDIKTSAHLSSSYSEDGSGSGATSLSSSLDSFEFDFPVKASVPLDDAYSVPDGFPRKPVPVGPNHQATIPVWRGRGTEVSVLTGTNNVDGNEQKLMGTCVISMPDSSFYSSESHQDEGRTECTCLDQYSIRCVRQHVREKRENLMKTLGKETFMNLGFGLMGEEVVALKWSEEEEYLFHEIVYTNPVTLGRNFWKQLSAAFPSRTMKDIVSYYYNVFMLRRRAAQNRSRFLNVDSDDEESPTSNNVGFYGFEVSEEDDSAIESPDEQHVHVGHQDNYSDDDGEDDNSDNGTDGGFIDIDGYDKGNVTDSNYQIESLSEPVQQINENQGISVGSGVQDDSCMSFECQINMDEPCPPRGDHNDASHALQAAGFKCDQSPLIPGILDFSSDSLEHVYFSEPCDAKDWYLGYSAGPASDIDFSATSKLIEEFLCQVTPDRKTKND 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01059 519 MobiDBLite consensus disorder prediction 341 355 - -
Accr10g01059 519 Pfam Myb-like DNA-binding domain 247 294 IPR001005 -
Accr10g01059 519 PANTHER DNA BINDING PROTEIN 1 509 - -
Accr10g01059 519 ProSiteProfiles Myb-like domain profile. 247 295 IPR001005 -
Accr10g01059 519 SMART sant 244 297 IPR001005 -
Accr10g01059 519 CDD SANT 247 295 IPR001005 -
Accr10g01059 519 Gene3D - 248 313 - -
Accr10g01059 519 MobiDBLite consensus disorder prediction 334 381 - -
Accr10g01059 519 SUPERFAMILY Homeodomain-like 247 295 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01059 Accr-Chr10 32110505 32112207 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Accr10g01059 Myb_DNA-binding 4e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01059 - - pcin:129311877 778.089