LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr10g01050	ATGTCCGCCGAGAAGGAGAGAGATGGCTACGTTTACATGGCCAAGCTCGCTGAGCAGGCTGAGAGATATGAGGAAATGGTTGACTCCATGAAGAAAGTAGCAAAGCTTGATATTGATCTAACTGTGGAAGAAAGGAACCTCCTCTCTGTAGGATATAAAAATGTCATTGGTTCAAGGCGAGCCTCATGGCGCATAATGTCTTCAATTGAACAGAAGGAAGAGTCTAAGGGAAACGAGCAAAATGTTAAACTGATCAAGGGTTATCGCCAAAAGGTTGAGGAAGAACTATCCAAGATTTGCAATGACATTCTGACAATCATTGATGAGCATCTGCTTCCCTCTGCTTCACCAGGAGAAGCCACTGTTTTCTACCACAAGATGAAGGGTGACTATTATCGCTATCTTGCTGAGTTCAAGGCTGGTGAAGAAAAGAAAGAGGCAGCTGATCAGTCAATGAAAGCATATGAGATTGCTTCAGCCACTGCAAACAATGAACTACCATCAACTCACCCAATCCGTCTTGGACTTGCACTCAACTTCTCTGTCTTCCATTTTGAGATCATGAATTCTGCTGAGAGTGCCTGTAAGTTGGCCAAACAAGCCTTTGATGAGGCAATTGCGGATTTAGATAGCCTGAGTGAAGAATCATACAAGGACAGCACTTTGATCATGCAGTTGTTGAGAGACAACCTGACTCTTTGGACCTCTGATCTGCCTGAGGATGGAGGTGAAGATGGCAACAAAGGTGAAGAGTCCAAACCTGTTGAACCCGAGAAGGAGCAGAAGGAATAA	792	0.4432	MSAEKERDGYVYMAKLAEQAERYEEMVDSMKKVAKLDIDLTVEERNLLSVGYKNVIGSRRASWRIMSSIEQKEESKGNEQNVKLIKGYRQKVEEELSKICNDILTIIDEHLLPSASPGEATVFYHKMKGDYYRYLAEFKAGEEKKEAADQSMKAYEIASATANNELPSTHPIRLGLALNFSVFHFEIMNSAESACKLAKQAFDEAIADLDSLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGEDGNKGEESKPVEPEKEQKE	263

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr10g01050	263	Coils	Coil	13	33	-	-
	Accr10g01050	263	FunFam	14-3-3 protein epsilon	1	249	-	-
	Accr10g01050	263	PANTHER	14-3-3 PROTEIN	8	237	IPR000308	-
	Accr10g01050	263	Coils	Coil	195	215	-	-
	Accr10g01050	263	Pfam	14-3-3 protein	13	235	IPR023410	-
	Accr10g01050	263	SUPERFAMILY	14-3-3 protein	6	237	IPR036815	-
	Accr10g01050	263	SMART	1433_4	7	248	IPR023410	-
	Accr10g01050	263	Gene3D	-	1	245	IPR036815	-
	Accr10g01050	263	MobiDBLite	consensus disorder prediction	241	263	-	-
	Accr10g01050	263	MobiDBLite	consensus disorder prediction	235	263	-	-
	Accr10g01050	263	ProSitePatterns	14-3-3 proteins signature 2.	217	236	IPR023409	-
	Accr10g01050	263	ProSitePatterns	14-3-3 proteins signature 1.	45	55	IPR023409	-
	Accr10g01050	263	PIRSF	14-3-3	1	247	IPR000308	-
	Accr10g01050	263	PRINTS	14-3-3 protein zeta signature	154	180	IPR000308	-
	Accr10g01050	263	PRINTS	14-3-3 protein zeta signature	208	237	IPR000308	-
	Accr10g01050	263	PRINTS	14-3-3 protein zeta signature	39	68	IPR000308	-
	Accr10g01050	263	PRINTS	14-3-3 protein zeta signature	88	112	IPR000308	-
	Accr10g01050	263	PRINTS	14-3-3 protein zeta signature	119	141	IPR000308	-
	Accr10g01050	263	PRINTS	14-3-3 protein zeta signature	181	207	IPR000308	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr10g01050	Accr-Chr10	31948784	31951681	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Accr10g01050	3	253	14-3-3 family	AT1G26480	80.080	1.89e-152	424

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr10g01050	K06630		-	qsa:O6P43_025542	420.239