Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01048 ATGGCGTCGCAAATGGCGATCCTGGGTCGGACGCGTTCTCTGATCAAAGCGCTTCAATCTAACTACGCTAACACATCCGTGAAGACGATTAGCAGCTTCCCTTCCCTCTCTCAGGAGCCTCAACTCGCCGAATCTCCGGCAACGGCCGACCCAACCCCACTTCCTCCCAACCCGGCCTCCGGTAGTCCTCTCTACAATGAGAATTGGCGCAGCCCAATCCCACCTTCTGCAACCCAGTCAGTGATCCCACTGGGGTTCCTTAATCTAGTACCCGGTCATCGCATCCAAACAATGGCTCAGACATTTGATGCTAAGAGTTTGATGGATCAGTTTGCTAATTGGGTGGCCTCTCAGGAATGGGCTGCTATCAAAGAGTTGTTCGAGTCTTGGGTCAAGTCATTGGACAAGAATGGGAAGCCGAATAAGCCTGATGTGAATTTGTATAATCATTATCTGAGAGCAAACTTGATGATTGGCTTTTCTGCTGGGGAGCTACTTGATTTGTTGGCGGGAATGGAGGATTTTGGTATCGCACCTAATACTGCTTCGTTCAATTTGGTGCTTAAAGCAATGTACCACGCCAAGGAGACTGAAGCTGCTCAGAAGTTGCTGGAACGGATGCTGCTGACTGGAAATGAATCTCGCCCTGATAATGAATCATATGACTTGGTCATCGGAATGCTGTTTTTGACTGGCGAAATTGATGCTGCATTGAAATATATAGATTTGGCTTTGAAATCAAGTTATATGTTGTCAATGAATGTGTTCACAAACTGTGTAAATAGTTGTATCAAAAAGGGTAGGCTAGATACTTTGGCAGCAATAATTGAAAAGTGCAAGACAATGGATCAGAACAAAGCTCTTTGCCCTCCATGGAATGTGTGCTACTTAATAGCTGAAACTGCAATGCATCAGGATAATAGTAAGCTAGCTTACCATGCCCTGGAGTTTATGGCTATGTGGATTGCAAGGGGTGAGAAGGCAAGACCGCCTGCTTCGCTTTCTGTAGATGAAGGTTTACTTGTGTCAGCGCTAGCCACTGCAGGTAGGACCTATAGTTCTACTCTGCTAGATGCAGCATGGAGTATTTTGCGGCGTCAAAGAAAGGCTCCTAACCCTGAATCTTATCTCGCAAAGATAAATGGCCTTGCATCTATGGGGAACTTACAAAGGGCTTTTTCTACGCTACATGACTTTGAGGTTGCTTATGGAGACTCCAGTGAAGAAACTGAAGAGATGTTCTCTCCCTTTACTTCTTTACATCCATTGGTTGTGGCATGCTCCAAGAAGGGATTTGAGACATTGGATTCTGTCTATTTTCAACTGGAAAGTTTGAGCCGAGCAGAGAATCCTTATAAATCTGTTTTTGCTCTAAACTGCGTCATTTTGGGGTGTGCAAACATATGGGACATTGATCGTGCATACCAAACTTTTGAGGCAATTGGATCCTCTTTTGGATTGACACCTGATATTCATTCATATAATGCGCTGATGCATGCATTTGGGAAGCTCAAAAAGACACATGAAGCAACTAAGGTGTTTGAGCACGTAGTGAGCTTGGGTGTAAAGCCTAATGCATTGTCATATTCTCTGCTCGTGGATGCCCACCTCATGAACCGAAATGTCAAAGATGCTCTAACTGTAATTGACGATATGGTGGCTGCTGGATTTGAACCTACAAAAGAGACGCTAAAAAAGGTTCGAAGGCGATGCATACGAGAGATGGACTATGACAGTGACGATAGAGTTCAGTCCATCGCCAAATCTCTGAACATTCGAATGGGTTCAGAAGCCCGTCGGGACATTCTATTCAATCTTAATTACAGCATGGATTTTGCTTAA 1842 0.4468 MASQMAILGRTRSLIKALQSNYANTSVKTISSFPSLSQEPQLAESPATADPTPLPPNPASGSPLYNENWRSPIPPSATQSVIPLGFLNLVPGHRIQTMAQTFDAKSLMDQFANWVASQEWAAIKELFESWVKSLDKNGKPNKPDVNLYNHYLRANLMIGFSAGELLDLLAGMEDFGIAPNTASFNLVLKAMYHAKETEAAQKLLERMLLTGNESRPDNESYDLVIGMLFLTGEIDAALKYIDLALKSSYMLSMNVFTNCVNSCIKKGRLDTLAAIIEKCKTMDQNKALCPPWNVCYLIAETAMHQDNSKLAYHALEFMAMWIARGEKARPPASLSVDEGLLVSALATAGRTYSSTLLDAAWSILRRQRKAPNPESYLAKINGLASMGNLQRAFSTLHDFEVAYGDSSEETEEMFSPFTSLHPLVVACSKKGFETLDSVYFQLESLSRAENPYKSVFALNCVILGCANIWDIDRAYQTFEAIGSSFGLTPDIHSYNALMHAFGKLKKTHEATKVFEHVVSLGVKPNALSYSLLVDAHLMNRNVKDALTVIDDMVAAGFEPTKETLKKVRRRCIREMDYDSDDRVQSIAKSLNIRMGSEARRDILFNLNYSMDFA 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01048 613 Pfam Pentatricopeptide repeat domain 142 191 IPR002885 -
Accr10g01048 613 PANTHER OS07G0599000 PROTEIN 1 612 IPR044605 -
Accr10g01048 613 Gene3D Tetratricopeptide repeat domain 432 590 IPR011990 GO:0005515
Accr10g01048 613 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 525 559 IPR002885 -
Accr10g01048 613 NCBIfam pentatricopeptide repeat 492 526 IPR002885 -
Accr10g01048 613 NCBIfam pentatricopeptide repeat 528 560 IPR002885 -
Accr10g01048 613 Gene3D Tetratricopeptide repeat domain 109 324 IPR011990 GO:0005515
Accr10g01048 613 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 490 524 IPR002885 -
Accr10g01048 613 Pfam PPR repeat family 489 535 IPR002885 -
Accr10g01048 613 MobiDBLite consensus disorder prediction 34 70 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01048 470 579 Glycosyltransferase AT1G05670 28.182 3.95e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01048 - - qsa:O6P43_025544 936.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr10g01048 10 31919855 31923432 Accr10g01048 10 31919855 31923432 ECH