Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01041 ATGCTTTCTCTTCCCCTCCCTTCCGTTGCGGTGCCGACGCGGACTAGACGCTCGCCTTTTCCGACGCGCTTCGTGGTTGTGGCTCATGGATTCCCTTCCTTTCTCCCCAAGCAAGTCCAACAAATCAAAGATCCTTTCGCTAGGAACTTCGCTCTCAGGATTCAGCGACTTCCCGTTCCTGTTAACTTCTCAGAAAATCCCATCATGAGTAGTTGCGTGAAGCCAGTGATGCAGAACAAGGCAAATCCAATAGTTCTTCTGCATAGTTTTGACAGCTCATGTTTAGAATGGAGATATGCTTATCCATTGATTGAAGAAGCTGGTTTTGAGGCCTGGGCCATTGACATTCTTGGTTGGGGTTTCTCTGATTTAGAAAATCTTCCAATATGTGATGTGGCATCCAAGCGCCATCATTTCTACCAGTTTTGGAAGTCCTACATCAGAAGGCCAATGATATTGGTTGGACCAAGCCTTGGTTCTGCTGTTGCCATTGACTTTGCTGCCAATCATCCAGAAGCTGTGGAGAGGCTTGTTTTGATTGGTTCCTGTGTATATGCAGAGGGAACTGGACTGCTAGCAACTTTACCTAGAGTGGCAGCTTATGCTGGGGTATACCTGTTGAAGAGCATCCCATCGCGCTTGTATAGGACTTATTTGACCTTCTCTGATGTATCATTAAGTACCAGTCTTGACTTGGCTAGTGTGGATCGCTTGCATTGCTTATTGCCTTGGTGGGAGGATGCTACAGTGGATTTCATAGCTAGTGGCGGTTATAATGTTGCTTCTCTGATAAAAGAGATAAAGCAGAAAACTCTCATTATTTGGGGTGAGAATGATCGCATCATCAGCAATAAACTTGCAGTGCGGCTGCATTCTGAGTTACCTGATGCAATATTACGCCAAATACCAAATTGTGGCCATCTGCCTCATCTGGAAAGGCCTGGTTCAGCTGTCAAATTGATTCTTGAGTTTGTTGAGAGAGAAACCAACATTGTGAATCACTGTGTTTCACATATATGA 1020 0.451 MLSLPLPSVAVPTRTRRSPFPTRFVVVAHGFPSFLPKQVQQIKDPFARNFALRIQRLPVPVNFSENPIMSSCVKPVMQNKANPIVLLHSFDSSCLEWRYAYPLIEEAGFEAWAIDILGWGFSDLENLPICDVASKRHHFYQFWKSYIRRPMILVGPSLGSAVAIDFAANHPEAVERLVLIGSCVYAEGTGLLATLPRVAAYAGVYLLKSIPSRLYRTYLTFSDVSLSTSLDLASVDRLHCLLPWWEDATVDFIASGGYNVASLIKEIKQKTLIIWGENDRIISNKLAVRLHSELPDAILRQIPNCGHLPHLERPGSAVKLILEFVERETNIVNHCVSHI 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01041 339 PRINTS Epoxide hydrolase signature 108 123 IPR000639 GO:0003824
Accr10g01041 339 PRINTS Epoxide hydrolase signature 167 180 IPR000639 GO:0003824
Accr10g01041 339 PRINTS Epoxide hydrolase signature 302 324 IPR000639 GO:0003824
Accr10g01041 339 PRINTS Epoxide hydrolase signature 88 106 IPR000639 GO:0003824
Accr10g01041 339 PRINTS Alpha/beta hydrolase fold signature 153 166 IPR000073 -
Accr10g01041 339 PRINTS Alpha/beta hydrolase fold signature 108 123 IPR000073 -
Accr10g01041 339 PRINTS Alpha/beta hydrolase fold signature 271 285 IPR000073 -
Accr10g01041 339 PRINTS Alpha/beta hydrolase fold signature 167 180 IPR000073 -
Accr10g01041 339 PANTHER HYDROLASE 29 328 - -
Accr10g01041 339 Pfam alpha/beta hydrolase fold 82 314 IPR000073 -
Accr10g01041 339 Gene3D alpha/beta hydrolase 74 334 IPR029058 -
Accr10g01041 339 SUPERFAMILY alpha/beta-Hydrolases 81 326 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01041 Accr-Chr10 31843552 31849097 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01041 83 325 Acyl Lipid Metabolism Gene Families AT3G10840 24.444 2.49e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01041 - - gmx:100814882 504.982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr10g01041 10 31843552 31849097 Accr10g01041 10 31843552 31849097 ECH